Gene
NF1
neurofibromin 1
- HGNC 7765↗(opens in a new tab)
- Ensembl gene ENSG00000196712↗(opens in a new tab)
- NCBI Gene 4763↗(opens in a new tab)
Summary
- Cytogenetic location
- 17q11.2
- Coordinates
- Chromosome 17: 31,094,977–31,377,675 (GRCh38)
- Exons
- 58 exons across 282.7 kb
- Protein
- 2,839 amino acids
- Inheritance
- Autosomal dominant
- MANE Select transcript
- ENST00000358273.9NM_001042492.3
- Locus type
- gene with protein product
Reference genomeGRCh38hg38
Positions on gene and variant pages follow this choice, in this browser.
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Neurofibromatosis
- Autosomal dominant
A hereditary neoplastic syndrome in which tumors grow in the nervous system. There are typically 3 main types recognized, but other forms with uncertain etiology exist.
- ClinGen rates the link definitive
- 5 GenCC submitters rate it definitive or strong
What knowing changes
Genotype-phenotype correlation, MEK inhibitor therapy for inoperable plexiform neurofibromas, Tumor surveillance, cascade testing
Inheritance
- Autosomal dominant
- One changed copy, from either parent, is enough. A parent who has one passes it on to each child with a one-in-two chance.
How NF1 is laid out
- Coding sequence
- Untranslated region
- Intron
- Direction of transcription
- Known disease-causing sites
- Stretches short reads find hard
Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.
Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).
Nearby genes from Ensembl release 116, on GRCh38.
Exons make up 12.4 kb of the gene's 282.7 kb; 8,520 of those bases code for the protein.
How a genome test reads NF1
3,594
positions in NF1 where ClinVar classes a change as pathogenic or likely pathogenic
1,698 of them (47%) fall in regions short reads find hard.
- Low mappability (137 sites)Regions where 100 bp or 250 bp reads cannot be placed uniquely.
- Segmental duplications (1,698 sites)Copies of at least 1 kb sharing at least 90% identity with another part of the genome (paralogues, pseudogenes); reads may align to the wrong copy.
A whole genome covers all 282.7 kb of NF1, introns included, not only the 12.4 kb of exons.
Genes linked to the same conditions
Traits linked to NF1
The Human Phenotype Ontology lists these as features of the rare conditions NF1 can cause. Each trait's page lists the other genes linked to it.
Abnormality of the nervous system
- Glioma
- Poor social interactions
- Short attention span
- Specific learning disability
- Abnormal central motor function
- Attention deficit
- Behavioral abnormality
- Brain imaging abnormality
Show 42 more traits
- Difficulty sleeping
- Episodic paroxysmal anxiety
- Global developmental delay
- Headache
- Intellectual disability
- Language impairment
- Memory impairment
- Migraine
- Moderate global developmental delay
- Neurodevelopmental delay
- Partial paralysis of legs
- Recurrent paroxysmal headache
- Speech articulation difficulties
- Split spine
- Autism spectrum disorder
- Brain neoplasm
- Brainstem glioma
- Cerebellar glioma
- Cranial nerve compression
- Delayed speech and language development
- Epilepsy
- Impaired visuospatial constructive cognition
- Inability to move vocal cords
- Multiple mucosal neuromas
- Optic nerve glioma
- Panic attack
- Peripheral nerve disease
- Recurrent subcortical infarcts
- Schwannoma
- Seizure affecting one half of brain
- Tremor
- Underdevelopment of part of brain called corpus callosum
- Astrocytoma
- Cancer of early nerve cells
- Dural ectasia
- Lower limb dysmetria
- Pilocytic astrocytoma
- Too much cerebrospinal fluid in the brain
- Aqueductal stenosis
- Hypsarrhythmia
- Intellectual disability, mild
- Noncancerous growth of membranes covering brain
Abnormality of head or neck
- Abnormality of the face
- Downward slanting of the opening between the eyelids
- Webbed neck
- Abnormal facial shape
- Abnormal tooth enamel
- Abnormally small head
- Big calvaria
- Broad neck
Show 32 more traits
- Coarse facial features
- Eye folds
- Full lips
- Lisch nodules
- Low hairline at back of neck
- Thin dental enamel
- Abnormal dental pulp morphology
- Abnormal internal carotid artery morphology
- Abnormality of the sphenoid sinus
- Broad forehead
- Cleft nasal bridge
- Decreased volume of lip
- Deviated nasal septum
- Facial asymmetry
- High palate
- Little lower jaw
- Long face
- Long philtrum
- Narrow forehead
- Prominent area between the eyebrows
- Retinal capillary hemangioma
- Sparse eyebrow
- Sparse eyelashes
- Thick nasal alae
- Zygomatic flattening
- Depressed nasal bridge
- Sinus disease
- Deep laugh lines
- Midface retrusion
- Relatively large head
- Short neck
- Sphenoid wing dysplasia
Abnormality of the cardiovascular system
- Enlarged and thickened heart muscle
- Narrowing of pulmonic valve
- Abnormality of the heart
- Abnormality of the lymphatic system
- Decrease in blood pressure upon standing up
- Fainting spell
- High blood pressure
- Hypertension associated with pheochromocytoma
Show 27 more traits
- Hypertensive retinopathy
- Palpitations
- Positive regitine blocking test
- Sinus tachycardia
- Telangiectasia of the skin
- Arachnoid hemangiomatosis
- Brain aneurysm
- Cardiac failure
- Disease of the heart muscle
- Hypertensive crisis
- Increased blood pressure in blood vessels of lungs
- Inflammation of heart muscle
- Narrowing of a cerebral artery
- Narrowing of aorta
- Narrowing of kidney artery
- Renovascular hypertension
- Retinal neovascularization
- Stroke
- An opening in the wall separating the top two chambers of the heart
- Hole in heart wall separating two lower heart chambers
- Mitral regurgitation
- Mitral stenosis
- Mitral valve prolapse
- Patent foramen ovale
- Strawberry mark
- Swelling or irritation of membrane around heart
- Secundum atrial septal defect
Abnormality of the musculoskeletal system
- Abdominal wall muscle weakness
- Abnormality of the chest
- Abnormality of the skeletal system
- Beaking of vertebral bodies T12-L3
- Bone cyst
- Double-Jointed
- Funnel chest
- Low muscle tone
Show 17 more traits
- Pigeon chest
- Scoliosis
- Abnormality of the vertebral column
- Breakdown of bone
- Hunched back
- Narrowing of medullary canal
- Osteopenia
- Osteoporosis
- Thickened cortex of long bones
- Embryonal rhabdomyosarcoma
- Fatty lump
- Kyphoscoliosis
- Prominent swayback
- Rhabdomyosarcoma
- Muscle weakness
- Pectus excavatum of inferior sternum
- Superior pectus carinatum
Abnormality of the eye
- Drooping upper eyelid
- Wide-set eyes
- Progressive loss of vision
- Abnormal choroid morphology
- Abnormally close eyes
- Blindness
- Bulging eye
- Cross-eyed
Show 3 more traits
Abnormality of limbs
- Large hands
- Long foot
- Outward turned elbows
- High-arched foot
- Knock knees
- Abnormality of the shankbone
- Bowed legs
- Diaphyseal dysplasia
Show 2 more traits
Abnormality of the endocrine system
- Pheochromocytoma
- Adrenal pheochromocytoma
- Extraadrenal pheochromocytoma
- Paraganglioma
- Paraganglioma of head and neck
- Delayed puberty
- Early onset of puberty
- Glomus jugular tumor
Show 2 more traits
Laboratory abnormality
- Elevated urinary dopamine
- Elevated urinary epinephrine level
- Elevated urinary norepinephrine level
- High blood calcium levels
- High urine protein levels
- Blood in urine
- Elevated calcitonin
- Elevated circulating parathyroid hormone level
Show 1 more trait
External links
Gene records
Transcript
Protein
Where this comes from
- HGNC: the gene's symbol, name, other symbols and location.
- MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
- GenCC and ClinGen, released 2026-10-16: which conditions the gene is linked to, and how strongly.
- The ACMG secondary findings list, SF v3.2.
- ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
- The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
- Data release 2026.10.16-c6eea6bf.
Cite this page
Dante Labs. (n.d.). NF1 gene: neurofibromin 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/nf1
Dante Labs. NF1 gene: neurofibromin 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/nf1
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