Trait
Coxa vara
Coxa vara includes all forms of decrease of the femoral neck shaft angle (the angle between the neck and the shaft of the femur) to less than 120 degrees.
Summary
Reference genomeGRCh38hg38
Positions on gene and variant pages follow this choice, in this browser.
Read the genes linked to Coxa vara, and the rest of your genome, with one test.
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Get my Genome Test65 genes linked to Coxa vara
Changes in these genes cause rare conditions in which Coxa vara is seen. Most people with this trait have none of those conditions, and a gene on this list says nothing about anyone's own genome.
| Gene | How often it is seen | Conditions |
|---|---|---|
| COL10A1collagen type X alpha 1 chain | Always | In 2 conditions |
| CRTAPcartilage associated protein | Always | In 1 condition |
| NDC1NDC1 transmembrane nucleoporin | Always | In 1 condition |
| NKX3-2NK3 homeobox 2 | Always | In 1 condition |
| RPL13ribosomal protein L13 | Always | In 1 condition |
| ATP6V0A2ATPase H+ transporting V0 subunit a2 | Very often (80–99%) | In 2 conditions |
| COL2A1collagen type II alpha 1 chain | Very often (80–99%) | In 8 conditions |
| DMP1dentin matrix acidic phosphoprotein 1 | Very often (80–99%) | In 1 condition |
| ENPP1ectonucleotide pyrophosphatase/phosphodiesterase 1 | Very often (80–99%) | In 1 condition |
| FN1fibronectin 1 | Very often (80–99%) | In 2 conditions |
| IHHIndian hedgehog signaling molecule | Very often (80–99%) | In 2 conditions |
| PCNTpericentrin | Very often (80–99%) | In 2 conditions |
| PCYT1Aphosphate cytidylyltransferase 1A, choline | Very often (80–99%) | In 2 conditions |
| PRG4proteoglycan 4 | Very often (80–99%) | In 2 conditions |
| CANT1calcium activated nucleotidase 1 | Often (30–79%) | In 2 conditions |
| COL27A1collagen type XXVII alpha 1 chain | Often (30–79%) | In 1 condition |
| COL9A1collagen type IX alpha 1 chain | Often (30–79%) | In 2 conditions |
| CSGALNACT1chondroitin sulfate N-acetylgalactosaminyltransferase 1 | Often (30–79%) | In 1 condition |
| EXTL3exostosin like glycosyltransferase 3 | Often (30–79%) | In 1 condition |
| HSPG2heparan sulfate proteoglycan 2 | Often (30–79%) | In 2 conditions |
| NFIXnuclear factor I X | Often (30–79%) | In 1 condition |
| PEX5peroxisomal biogenesis factor 5 | Often (30–79%) | In 1 condition |
| RAD21RAD21 cohesin complex component | Often (30–79%) | In 1 condition |
| RMRPRNA component of mitochondrial RNA processing endoribonuclease | Often (30–79%) | In 1 condition |
| RNU4ATACRNA, U4atac small nuclear | Often (30–79%) | In 1 condition |
| RSPRY1ring finger and SPRY domain containing 1 | Often (30–79%) | In 1 condition |
| RUNX2RUNX family transcription factor 2 | Often (30–79%) | In 2 conditions |
| SLC26A2solute carrier family 26 member 2 | Often (30–79%) | In 1 condition |
| TRPV4transient receptor potential cation channel subfamily V member 4 | Often (30–79%) | In 2 conditions |
| XYLT1xylosyltransferase 1 | Often (30–79%) | In 1 condition |
| ATP7AATPase copper transporting alpha | Sometimes (5–29%) | In 1 condition |
| CCN6cellular communication network factor 6 | Sometimes (5–29%) | In 2 conditions |
| COL9A2collagen type IX alpha 2 chain | Sometimes (5–29%) | In 1 condition |
| COL9A3collagen type IX alpha 3 chain | Sometimes (5–29%) | In 1 condition |
| DVL1dishevelled segment polarity protein 1 | Sometimes (5–29%) | In 1 condition |
| DVL3dishevelled segment polarity protein 3 | Sometimes (5–29%) | In 1 condition |
| DYMdymeclin | Sometimes (5–29%) | In 1 condition |
| FKBP10FKBP prolyl isomerase 10 | Sometimes (5–29%) | In 2 conditions |
| FZD2frizzled class receptor 2 | Sometimes (5–29%) | In 1 condition |
| KDELR2KDEL endoplasmic reticulum protein retention receptor 2 | Sometimes (5–29%) | In 1 condition |
Show 25 more genes
| Gene | How often it is seen | Conditions |
|---|---|---|
| MATN3matrilin 3 | Sometimes (5–29%) | In 1 condition |
| MEGF8multiple EGF like domains 8 | Sometimes (5–29%) | In 1 condition |
| SLC2A10solute carrier family 2 member 10 | Sometimes (5–29%) | In 1 condition |
| SLC4A10solute carrier family 4 member 10 | Sometimes (5–29%) | In 1 condition |
| TONSLtonsoku like, DNA repair protein | Sometimes (5–29%) | In 2 conditions |
| TRAPPC2trafficking protein particle complex subunit 2 | Sometimes (5–29%) | In 2 conditions |
| TTI1TELO2 interacting protein 1 | Sometimes (5–29%) | In 1 condition |
| UFSP2UFM1 specific peptidase 2 | Sometimes (5–29%) | In 1 condition |
| WNT5AWnt family member 5A | Sometimes (5–29%) | In 1 condition |
| COMPcartilage oligomeric matrix protein | Rarely (1–4%) | In 1 condition |
| AIFM1apoptosis inducing factor mitochondria associated 1 | Not recorded | In 1 condition |
| CFAP410cilia and flagella associated protein 410 | Not recorded | In 1 condition |
| DDRGK1DDRGK domain containing 1 | Not recorded | In 1 condition |
| DNAJC21DnaJ heat shock protein family (Hsp40) member C21 | Not recorded | In 1 condition |
| EXT1exostosin glycosyltransferase 1 | Not recorded | In 1 condition |
| EXT2exostosin glycosyltransferase 2 | Not recorded | In 1 condition |
| FLNBfilamin B | Not recorded | In 1 condition |
| MMP13matrix metallopeptidase 13 | Not recorded | In 1 condition |
| ORC6origin recognition complex subunit 6 | Not recorded | In 1 condition |
| POP1POP1 ribonuclease P/MRP subunit | Not recorded | In 1 condition |
| SBDSSBDS ribosome maturation factor | Not recorded | In 1 condition |
| SERPINF1serpin family F member 1 | Not recorded | In 1 condition |
| SRP54signal recognition particle 54 | Not recorded | In 1 condition |
| TBX4T-box transcription factor 4 | Not recorded | In 1 condition |
| TCIRG1T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 | Not recorded | In 1 condition |
How often is among people with one of the gene's conditions, the most often across them, as the Human Phenotype Ontology records it. These pages describe traits and the research behind them; they are not a diagnosis, and a doctor or genetic counsellor is the person to ask about symptoms.
Broader traits
Where this comes from
- The Human Phenotype Ontology, release 2026-09-01: the trait, its names, its definition and the genes linked to it. Find out more at hpo.jax.org.
- Data release 2026.10.16-c6eea6bf.
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