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Gene

CCN6

cellular communication network factor 6

Summary

Cytogenetic location
6q21
Coordinates
Chromosome 6: 112,054,104–112,069,686 (GRCh38)
Exons
5 exons across 15.6 kb
Protein
354 amino acids
Also known as
WISP-3
Previous symbols
WISP3
MANE Select transcript
ENST00000368666.7NM_198239.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CCN6 yet. The test sequences your whole genome, so your data includes it all the same.

How CCN6 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
Chromosome 6, with a bracket where CCN6 sits. CCN6 and 7 genes near it on chromosome 6, from 111,561,895 to 112,561,894.Chromosome 66q21p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q27111.6 Mb111.8 Mb112 Mb112.2 Mb112.4 MbTRAF3IP2: 111,555,381–111,606,910, reverse strandTRAF3IP2FYN: 111,660,332–111,873,479, reverse strandFYNCCN6: 112,054,104–112,069,686, forward strandCCN6TUBE1: 112,070,660–112,087,569, reverse strandTUBE1FAM229B: 112,087,122–112,104,326, forward strandFAM229BLAMA4: 112,106,077–112,254,939, reverse strandLAMA4: 112,236,806–112,350,094, forward strandRFPL4B: 112,347,330–112,351,294, forward strandRFPL4BDiagram of CCN6: 5 exons on the forward strand of chromosome 6Exon 1: 2 known disease-causing sitesExon 2: 9 known disease-causing sitesExon 3: 2 known disease-causing sitesExon 4: 7 known disease-causing sitesExon 5: 5 known disease-causing sitesExon 1: 112,054,104–112,054,405, 302 basesExon 2: 112,060,991–112,061,288, 298 basesExon 3: 112,064,755–112,064,997, 243 basesExon 4: 112,068,205–112,068,398, 194 basesExon 5: 112,069,339–112,069,686, 348 bases123455′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.4 kb of the gene's 15.6 kb; 1,065 of those bases code for the protein.

How a genome test reads CCN6

29

positions in CCN6 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 15.6 kb of CCN6, introns included, not only the 1.4 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). CCN6 gene: cellular communication network factor 6. Retrieved 17 October 2026, from https://dantelabs.com/genes/ccn6

Vancouver

Dante Labs. CCN6 gene: cellular communication network factor 6 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ccn6

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