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Gene

TRPS1

transcriptional repressor GATA binding 1

Summary

Cytogenetic location
8q23.3
Coordinates
Chromosome 8: 115,408,496–115,668,975 (GRCh38)
Exons
7 exons across 260.5 kb
Protein
1,294 amino acids
Also known as
LGCR, GC79
MANE Select transcript
ENST00000395715.8NM_014112.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads TRPS1 yet. The test sequences your whole genome, so your data includes it all the same.

How TRPS1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 8, with a bracket where TRPS1 sits. TRPS1 and 0 genes near it on chromosome 8, from 115,038,736 to 116,038,735.Chromosome 88q23.3p23.3p23.2p23.1p22p21.3p21.2p21.1p12p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q12.1q12.2q12.3q13.1q13.2q13.3q21.11q21.12q21.13q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.3115.2 Mb115.4 Mb115.6 Mb115.8 Mb116 MbTRPS1: 115,408,496–115,668,975, reverse strandTRPS1Diagram of TRPS1: 7 exons on the reverse strand of chromosome 8Exon 7: 29 known disease-causing sitesExon 6: 15 known disease-causing sitesExon 5: 26 known disease-causing sitesExon 4: 37 known disease-causing sitesExon 3: 13 known disease-causing sitesExon 7: 115,408,496–115,415,084, 6,589 basesExon 6: 115,418,330–115,418,452, 123 basesExon 5: 115,587,001–115,587,604, 604 basesExon 4: 115,603,873–115,605,002, 1,130 basesExon 3: 115,619,132–115,620,060, 929 basesExon 2: 115,623,601–115,623,758, 158 basesExon 1: 115,668,545–115,668,975, 431 bases76543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 10 kb of the gene's 260.5 kb; 3,885 of those bases code for the protein.

How a genome test reads TRPS1

126

positions in TRPS1 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 260.5 kb of TRPS1, introns included, not only the 10 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). TRPS1 gene: transcriptional repressor GATA binding 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/trps1

Vancouver

Dante Labs. TRPS1 gene: transcriptional repressor GATA binding 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/trps1

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