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Gene

LSM11

LSM11, U7 small nuclear RNA associated

Summary

Cytogenetic location
5q33.3
Coordinates
Chromosome 5: 157,743,712–157,760,709 (GRCh38)
Exons
4 exons across 17 kb
Protein
360 amino acids
Also known as
FLJ38273
MANE Select transcript
ENST00000286307.6NM_173491.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads LSM11 yet. The test sequences your whole genome, so your data includes it all the same.

How LSM11 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 5, with a bracket where LSM11 sits. LSM11 and 10 genes near it on chromosome 5, from 157,252,211 to 158,252,210.Chromosome 55q33.3p15.33p15.32p15.31p15.2p15.1p14.3p14.2p14.1p13.3p13.2p13.1p12p11q11.1q11.2q12.1q12.2q12.3q13.1q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q31.1q31.2q31.3q32q33.1q33.2q33.3q34q35.1q35.2q35.3157.4 Mb157.6 Mb157.8 Mb158 Mb158.2 MbITK: 157,142,933–157,255,185, forward strandITKCYFIP2: 157,266,079–157,395,595, forward strandCYFIP2: 157,341,596–157,460,100, reverse strandFNDC9: 157,341,598–157,345,766, reverse strandFNDC9ADAM19: 157,395,534–157,575,858, reverse strandADAM19NIPAL4: 157,460,213–157,474,723, forward strandNIPAL4SOX30: 157,624,798–157,671,480, reverse strandSOX30C5orf52: 157,671,515–157,680,174, forward strandC5orf52THG1L: 157,731,402–157,741,449, forward strandTHG1LLSM11: 157,743,712–157,760,709, forward strandLSM11CLINT1: 157,783,121–157,859,206, reverse strandCLINT1Diagram of LSM11: 4 exons on the forward strand of chromosome 5Exon 1: 157,743,712–157,744,198, 487 basesExon 2: 157,751,390–157,751,529, 140 basesExon 3: 157,754,004–157,754,087, 84 basesExon 4: 157,754,854–157,760,709, 5,856 bases12345′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.6 kb of the gene's 17 kb; 1,083 of those bases code for the protein.

Traits linked to LSM11

The Human Phenotype Ontology lists these as features of the rare conditions LSM11 can cause. Each trait's page lists the other genes linked to it.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). LSM11 gene: LSM11, U7 small nuclear RNA associated. Retrieved 17 October 2026, from https://dantelabs.com/genes/lsm11

Vancouver

Dante Labs. LSM11 gene: LSM11, U7 small nuclear RNA associated [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/lsm11

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