Gene
GDAP1
ganglioside induced differentiation associated protein 1
- HGNC 15968↗(opens in a new tab)
- Ensembl gene ENSG00000104381↗(opens in a new tab)
- NCBI Gene 54332↗(opens in a new tab)
Summary
- Cytogenetic location
- 8q21.11
- Coordinates
- Chromosome 8: 74,350,403–74,366,876 (GRCh38)
- Exons
- 6 exons across 16.5 kb
- Protein
- 358 amino acids
- Also known as
- CMT4, CMT2K
- Previous symbols
- CMT4A
- MANE Select transcript
- ENST00000220822.12NM_018972.4
- Locus type
- gene with protein product
- Very high
- Confident
- Low
- Very low
Reference genomeGRCh38hg38
Positions on gene and variant pages follow this choice, in this browser.
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Charcot-Marie-Tooth Disease
One of 62 genes linked to it
A group of inherited peripheral neuropathies causing progressive weakness and wasting of the distal muscles and loss of sensation, mainly in the feet and hands.
- ClinGen rates the link definitive
- 3 GenCC submitters rate it definitive or strong
What knowing changes
Genetic counseling, subtype-specific monitoring, physical therapy, orthotics, neurotoxic drug avoidance, gene-specific clinical trials, surveillance for associated features
How GDAP1 is laid out
- Coding sequence
- Untranslated region
- Intron
- Direction of transcription
- Known disease-causing sites
- Stretches short reads find hard
Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.
Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).
Nearby genes from Ensembl release 116, on GRCh38.
Exons make up 3.6 kb of the gene's 16.5 kb; 1,077 of those bases code for the protein.
How a genome test reads GDAP1
94
positions in GDAP1 where ClinVar classes a change as pathogenic or likely pathogenic
None of them falls in a region short reads find hard.
A whole genome covers all 16.5 kb of GDAP1, introns included, not only the 3.6 kb of exons.
Genes linked to the same conditions
- AARS1alanyl-tRNA synthetase 1Shares 1 condition
- AIFM1apoptosis inducing factor mitochondria associated 1Shares 1 condition
- ATP1A1ATPase Na+/K+ transporting subunit alpha 1Shares 1 condition
- CADM3cell adhesion molecule 3Shares 1 condition
- COX6A1cytochrome c oxidase subunit 6A1Shares 1 condition
- DHTKD1dehydrogenase E1 and transketolase domain containing 1Shares 1 condition
- DHX9DExH-box helicase 9Shares 1 condition
- DNM2dynamin 2Shares 1 condition
- DRP2dystrophin related protein 2Shares 1 condition
- DYNC1H1dynein cytoplasmic 1 heavy chain 1Shares 1 condition
- EGR2early growth response 2Shares 1 condition
- FBLN5fibulin 5Shares 1 condition
Traits linked to GDAP1
The Human Phenotype Ontology lists these as features of the rare conditions GDAP1 can cause. Each trait's page lists the other genes linked to it.
Abnormality of the nervous system
- Absent reflexes
- Decreased motor nerve conduction velocity
- Decreased number of large peripheral myelinated nerve fibers
- Decreased number of peripheral myelinated nerve fibers
- Decreased reflex response
- Decreased sensation in extremities
- Decreased sensory nerve conduction velocity
- Decreased touch sensation in extremities
Show 36 more traits
- Impaired distal vibration sensation
- Impaired pain sensation
- Onion bulb formation
- Peripheral demyelination
- Peripheral neuropathy
- Segmental peripheral demyelination
- Axonal loss
- Chronic axonal neuropathy
- Decreased nerve conduction velocity
- Decreased number of small peripheral myelinated nerve fibers
- Impaired touch sensation
- Impaired vibratory sensation
- Nerve damage causing decreased feeling and movement
- Peripheral axonal degeneration
- Poor fine motor coordination
- Poor gross motor coordination
- Abnormal gait
- Clumsy tandem walking
- Clusters of axonal regeneration
- Diminished deep tendon reflex
- Impaired distal proprioception
- Inability to walk
- Loss of ability to walk
- Motor delay
- Unsteady walk
- Weakness of the vocal cords
- Demyelinating peripheral neuropathy
- Motor conduction block
- Axonal degeneration
- Axonal regeneration
- Basal lamina onion bulb formation
- CNS hypomyelination
- Decreased distal sensory nerve action potential
- High stepping
- Hypertrophic nerve changes
- Inability to walk by childhood/adolescence
Abnormality of limbs
- Proximal lower limb muscle weakness
- Proximal upper limb muscle weakness
- Abnormal feet structure
- Distal lower limb muscle weakness
- Distal upper limb muscle weakness
- High-arched foot
- Club feet
- Club foot on both sides
Show 18 more traits
- Decreased Achilles reflex
- Decreased arm strength
- Hammertoe
- Hand muscle degeneration
- Hand muscle weakness
- Hyporeflexia of upper limbs
- Intrinsic hand muscle atrophy
- Joint contracture of the hand
- Limited movement of hinge joints
- Limited wrist movement
- Lower limb muscle weakness
- Peroneal muscle weakness
- Quadriceps weakness
- Split hand
- Ulnar claw
- Weak shoulder muscles
- Foot drop
- Limb muscle weakness
External links
Gene records
Transcript
Protein
Where this comes from
- HGNC: the gene's symbol, name, other symbols and location.
- MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
- GenCC and ClinGen, released 2026-10-16: which conditions the gene is linked to, and how strongly.
- The ACMG secondary findings list, SF v3.2.
- ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
- The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
- Data release 2026.10.16-c6eea6bf.
Cite this page
Dante Labs. (n.d.). GDAP1 gene: ganglioside induced differentiation associated protein 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/gdap1
Dante Labs. GDAP1 gene: ganglioside induced differentiation associated protein 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/gdap1
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