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Gene

UBAP2L

ubiquitin associated protein 2 like

Summary

Cytogenetic location
1q21.3
Coordinates
Chromosome 1: 154,220,955–154,270,847 (GRCh38)
Exons
27 exons across 49.9 kb
Protein
1,087 amino acids
Also known as
NICE-4, KIAA0144
MANE Select transcript
ENST00000428931.6NM_014847.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads UBAP2L yet. The test sequences your whole genome, so your data includes it all the same.

How UBAP2L is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 1, with a bracket where UBAP2L sits. UBAP2L and 26 genes near it on chromosome 1, from 153,745,901 to 154,745,900.Chromosome 11q21.3p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44153.8 Mb154 Mb154.2 Mb154.4 Mb154.6 MbINTS3: 153,728,050–153,774,808, forward strandINTS3SLC27A3: 153,774,208–153,780,180, forward strandSLC27A3GATAD2B: 153,789,030–153,923,360, reverse strandGATAD2BDENND4B: 153,928,862–153,946,749, reverse strandCRTC2: 153,947,669–153,958,642, reverse strandSLC39A1: 153,959,099–153,968,667, reverse strand: 153,959,151–153,975,887, reverse strandCREB3L4: 153,963,719–153,974,366, forward strandJTB: 153,974,269–153,978,011, reverse strand: 153,975,850–153,986,246, reverse strandRAB13: 153,981,617–153,986,382, reverse strandRAB13RPS27: 153,990,749–153,992,344, forward strandRPS27NUP210L: 153,992,690–154,155,116, reverse strandNUP210LTPM3: 154,155,308–154,194,648, reverse strandTPM3CFAP141: 154,199,085–154,206,352, reverse strandCFAP141LTAP1: 154,206,666–154,220,686, reverse strandLTAP1UBAP2L: 154,220,955–154,270,847, forward strandUBAP2LHAX1: 154,272,326–154,275,882, forward strandHAX1AQP10: 154,321,090–154,325,329, forward strandAQP10ATP8B2: 154,325,511–154,351,307, forward strandATP8B2IL6R: 154,405,141–154,469,450, forward strandIL6RSHE: 154,469,637–154,502,866, reverse strandSHETDRD10: 154,501,508–154,548,147, forward strandTDRD10UBE2Q1: 154,548,550–154,559,028, reverse strandUBE2Q1CHRNB2: 154,567,771–154,580,013, forward strandCHRNB2ADAR: 154,581,695–154,628,013, reverse strandADARKCNN3: 154,697,455–154,870,340, reverse strandKCNN3Diagram of UBAP2L: 27 exons on the forward strand of chromosome 1Exon 7: 1 known disease-causing siteExon 14: 1 known disease-causing siteExon 17: 2 known disease-causing sitesExon 20: 1 known disease-causing siteExon 25: 2 known disease-causing sitesExon 1: 154,220,955–154,220,975, 21 basesExon 2: 154,225,084–154,225,213, 130 basesExon 3: 154,227,282–154,227,359, 78 basesExon 4: 154,228,615–154,228,725, 111 basesExon 5: 154,234,591–154,234,759, 169 basesExon 6: 154,235,196–154,235,291, 96 basesExon 7: 154,236,566–154,236,611, 46 basesExon 8: 154,237,024–154,237,136, 113 basesExon 9: 154,241,513–154,241,565, 53 basesExon 10: 154,243,217–154,243,302, 86 basesExon 11: 154,246,204–154,246,375, 172 basesExon 12: 154,249,239–154,249,437, 199 basesExon 13: 154,251,041–154,251,318, 278 basesExon 14: 154,251,481–154,251,653, 173 basesExon 15: 154,253,900–154,254,089, 190 basesExon 16: 154,254,836–154,254,890, 55 basesExon 17: 154,255,152–154,255,326, 175 basesExon 18: 154,255,683–154,255,755, 73 basesExon 19: 154,257,063–154,257,258, 196 basesExon 20: 154,257,346–154,257,434, 89 basesExon 21: 154,258,977–154,259,030, 54 basesExon 22: 154,259,948–154,260,029, 82 basesExon 23: 154,260,892–154,261,109, 218 basesExon 24: 154,261,592–154,261,697, 106 basesExon 25: 154,266,501–154,266,568, 68 basesExon 26: 154,268,757–154,268,954, 198 basesExon 27: 154,270,200–154,270,847, 648 bases1510152025275′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.9 kb of the gene's 49.9 kb; 3,264 of those bases code for the protein.

How a genome test reads UBAP2L

7

positions in UBAP2L where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 49.9 kb of UBAP2L, introns included, not only the 3.9 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). UBAP2L gene: ubiquitin associated protein 2 like. Retrieved 17 October 2026, from https://dantelabs.com/genes/ubap2l

Vancouver

Dante Labs. UBAP2L gene: ubiquitin associated protein 2 like [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ubap2l

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