Gene
CYB5A
cytochrome b5 type A
- HGNC 2570↗(opens in a new tab)
- Ensembl gene ENSG00000166347↗(opens in a new tab)
- NCBI Gene 1528↗(opens in a new tab)
Summary
- Cytogenetic location
- 18q22.3
- Coordinates
- Chromosome 18: 74,250,846–74,291,963 (GRCh38)
- Exons
- 5 exons across 41.1 kb
- Protein
- 134 amino acids
- Also known as
- MCB5
- Previous symbols
- CYB5
- MANE Select transcript
- ENST00000340533.9NM_148923.4
- Locus type
- gene with protein product
- Very high
- Confident
- Low
- Very low
Reference genomeGRCh38hg38
Positions on gene and variant pages follow this choice, in this browser.
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Hereditary Methaemoglobinaemia and Unstable Haemoglobins
- Hereditary Methaemoglobinaemia
Raised methaemoglobin levels from birth, caused by recessive changes in CYB5R3 or CYB5A or by dominant haemoglobin M variants in the globin genes; type II CYB5R3 deficiency also causes severe developmental problems.
- ClinGen rates the link definitive
- 2 GenCC submitters rate it definitive or strong
What knowing changes
Knowing about it explains unexplained cyanosis and helps avoid medicines that raise methaemoglobin, such as dapsone, benzocaine and nitrites; methylene blue treats the enzyme forms but must not be given to people with G6PD deficiency.
How CYB5A is laid out
- Coding sequence
- Untranslated region
- Intron
- Direction of transcription
- Known disease-causing sites
- Stretches short reads find hard
Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.
Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).
Nearby genes from Ensembl release 116, on GRCh38.
Exons make up 3.2 kb of the gene's 41.1 kb; 405 of those bases code for the protein.
How a genome test reads CYB5A
2
positions in CYB5A where ClinVar classes a change as pathogenic or likely pathogenic
None of them falls in a region short reads find hard.
A whole genome covers all 41.1 kb of CYB5A, introns included, not only the 3.2 kb of exons.
Genes linked to the same conditions
Traits linked to CYB5A
The Human Phenotype Ontology lists these as features of the rare conditions CYB5A can cause. Each trait's page lists the other genes linked to it.
Abnormality of the genitourinary system
- Ambiguous external genitalia
- Cleft of scrotum
- Scrotal hypospadias
- Decreased fertility
- Enlarged ovaries with cysts
- Hypospadias
- Painful menstruation
- Polycystic ovaries
Show 12 more traits
- Primary amenorrhea
- Short penis
- Small uterus
- Decreased fertility in females
- Decreased fertility in males
- Decreased testicular size
- Underdeveloped vagina
- Undescended testes
- Abnormal sex determination
- Ambiguous genitalia in males
- Female external genitalia in individual with 46,XY karyotype
- Male pseudohermaphroditism
Abnormality of the endocrine system
- Decreased circulating dehydroepiandrosterone-sulfate concentration
- Elevated circulating luteinizing hormone level
- Abnormal circulating corticosterone level
- Absence of secondary sex characteristics
- Decreased circulating androgen concentration
- Decreased serum estradiol
- Decreased serum testosterone level
- Delayed puberty
External links
Gene records
Transcript
Protein
Where this comes from
- HGNC: the gene's symbol, name, other symbols and location.
- MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
- GenCC and ClinGen, released 2026-10-16: which conditions the gene is linked to, and how strongly.
- The ACMG secondary findings list, SF v3.2.
- ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
- The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
- Data release 2026.10.16-c6eea6bf.
Cite this page
Dante Labs. (n.d.). CYB5A gene: cytochrome b5 type A. Retrieved 16 October 2026, from https://dantelabs.com/genes/cyb5a
Dante Labs. CYB5A gene: cytochrome b5 type A [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/cyb5a
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