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Gene

GIPC1

GIPC PDZ domain containing family member 1

Summary

Cytogenetic location
19p13.12
Coordinates
Chromosome 19: 14,477,762–14,496,127 (GRCh38)
Exons
9 exons across 18.4 kb
Protein
333 amino acids
Also known as
TIP-2, Hs.6454, GIPC, SEMCAP, GLUT1CBP, SYNECTIN, NIP
Previous symbols
C19orf3, RGS19IP1
MANE Select transcript
ENST00000393033.9NM_005716.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated report relevant to this gene

  • Distal Myopathies

    • Distal myopathy

      A group of inherited muscle disorders in which weakness starts in the hands, forearms, lower legs or feet, caused by genes such as TTN, DYSF, FLNC, MYH7, ADSS1, SMPX and MATR3.

      • 1 GenCC submitter rates it definitive or strong

How GIPC1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 19, with a bracket where GIPC1 sits. GIPC1 and 28 genes near it on chromosome 19, from 13,986,945 to 14,986,944.Chromosome 1919p13.12p13.3p13.2p13.13p13.12p13.11p12p11q11q12q13.11q13.12q13.13q13.2q13.31q13.32q13.33q13.41q13.42q13.4314 Mb14.2 Mb14.4 Mb14.6 Mb14.8 MbRFX1: 13,961,529–14,007,084, reverse strandRFX1RLN3: 14,028,148–14,031,552, forward strandRLN3IL27RA: 14,031,644–14,053,223, forward strandIL27RAPALM3: 14,053,363–14,062,149, reverse strandMISP3: 14,072,108–14,075,062, forward strandC19orf67: 14,081,624–14,085,875, reverse strandSAMD1: 14,086,762–14,091,036, reverse strandSAMD1PRKACA: 14,091,688–14,118,084, reverse strandPRKACASMIM46: 14,112,324–14,112,476, reverse strandSMIM46ASF1B: 14,119,512–14,136,622, reverse strandASF1BADGRL1: 14,147,743–14,206,852, reverse strandADGRL1ADGRE5: 14,380,501–14,408,729, forward strandADGRE5DDX39A: 14,408,798–14,419,385, reverse strandDDX39APKN1: 14,433,053–14,471,872, forward strandPKN1PTGER1: 14,472,466–14,477,272, reverse strandPTGER1GIPC1: 14,477,762–14,496,127, reverse strandGIPC1DNAJB1: 14,513,789–14,560,391, reverse strandDNAJB1TECR: 14,517,085–14,565,988, forward strandTECRNDUFB7: 14,566,078–14,572,079, reverse strandNDUFB7CLEC17A: 14,583,084–14,612,035, forward strandCLEC17AADGRE3: 14,599,080–14,690,027, reverse strandADGRE3ZNF333: 14,689,801–14,733,746, forward strandZNF333ADGRE2: 14,731,152–14,778,560, reverse strandADGRE2OR7C1: 14,789,260–14,835,376, reverse strandOR7C1OR7A5: 14,826,241–14,835,285, reverse strandOR7A5OR7A10: 14,840,466–14,848,922, reverse strandOR7A10OR7A17: 14,878,203–14,886,132, reverse strandOR7A17OR7C2: 14,941,489–14,942,448, forward strandOR7C2SLC1A6: 14,950,024–15,022,990, reverse strandSLC1A6Diagram of GIPC1: 9 exons on the reverse strand of chromosome 19Exon 9: 14,477,762–14,478,567, 806 basesExon 8: 14,478,684–14,478,765, 82 basesExon 7: 14,479,412–14,479,524, 113 basesExon 6: 14,480,305–14,480,485, 181 basesExon 5: 14,480,593–14,480,778, 186 basesExon 4: 14,482,689–14,483,006, 318 basesExon 3: 14,491,656–14,491,743, 88 basesExon 2: 14,492,857–14,492,912, 56 basesExon 1: 14,496,037–14,496,127, 91 bases9876543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.9 kb of the gene's 18.4 kb; 1,002 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • GenCC and ClinGen, released 2026-10-16: which conditions the gene is linked to, and how strongly.
  • The ACMG secondary findings list, SF v3.2.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). GIPC1 gene: GIPC PDZ domain containing family member 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/gipc1

Vancouver

Dante Labs. GIPC1 gene: GIPC PDZ domain containing family member 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/gipc1

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