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Gene

KATNB1

katanin regulatory subunit B1

Summary

Cytogenetic location
16q21
Coordinates
Chromosome 16: 57,735,770–57,757,244 (GRCh38)
Exons
20 exons across 21.5 kb
Protein
655 amino acids
MANE Select transcript
ENST00000379661.8NM_005886.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads KATNB1 yet. The test sequences your whole genome, so your data includes it all the same.

How KATNB1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 16, with a bracket where KATNB1 sits. KATNB1 and 23 genes near it on chromosome 16, from 57,246,507 to 58,246,506.Chromosome 1616q21p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.357.4 Mb57.6 Mb57.8 Mb58 Mb58.2 MbARL2BP: 57,245,098–57,259,830, forward strandARL2BPPLLP: 57,248,547–57,284,683, reverse strandPLLPCCL22: 57,357,925–57,366,191, forward strandCCL22CX3CL1: 57,372,457–57,385,044, forward strandCX3CL1CCL17: 57,404,767–57,416,063, forward strandCCL17CIAPIN1: 57,428,169–57,447,420, reverse strandCIAPIN1COQ9: 57,447,425–57,461,275, forward strandCOQ9POLR2C: 57,462,648–57,472,010, forward strandPOLR2CDOK4: 57,471,917–57,487,382, reverse strandDOK4CCDC102A: 57,511,805–57,537,163, reverse strandCCDC102AADGRG5: 57,528,585–57,591,681, forward strandADGRG5ADGRG1: 57,610,652–57,665,580, forward strandADGRG1ADGRG3: 57,668,106–57,689,378, forward strandADGRG3DRC7: 57,694,790–57,731,805, forward strandDRC7KATNB1: 57,735,770–57,757,244, forward strandKATNB1KIFC3: 57,755,668–57,863,053, reverse strandKIFC3CNGB1: 57,881,892–57,971,128, reverse strandCNGB1SPMIP8: 57,976,435–57,988,116, forward strandSPMIP8ZNF319: 57,994,673–58,000,718, reverse strandZNF319USB1: 57,999,546–58,021,618, forward strandUSB1MMP15: 58,025,555–58,046,901, forward strandMMP15CFAP20: 58,113,167–58,129,429, reverse strandCFAP20CSNK2A2: 58,157,907–58,198,191, reverse strandCSNK2A2CFAP263: 58,231,157–58,283,836, forward strandCFAP263Diagram of KATNB1: 20 exons on the forward strand of chromosome 16Exon 2: 1 known disease-causing siteExon 3: 1 known disease-causing siteExon 11: 1 known disease-causing siteExon 12: 1 known disease-causing siteExon 1: 57,735,770–57,735,855, 86 basesExon 2: 57,736,978–57,737,283, 306 basesExon 3: 57,741,687–57,741,817, 131 basesExon 4: 57,744,394–57,744,511, 118 basesExon 5: 57,750,827–57,750,927, 101 basesExon 6: 57,751,261–57,751,302, 42 basesExon 7: 57,751,641–57,751,724, 84 basesExon 8: 57,751,940–57,752,055, 116 basesExon 9: 57,752,530–57,752,601, 72 basesExon 10: 57,752,778–57,752,928, 151 basesExon 11: 57,753,077–57,753,267, 191 basesExon 12: 57,753,389–57,753,519, 131 basesExon 13: 57,753,945–57,753,995, 51 basesExon 14: 57,754,930–57,754,997, 68 basesExon 15: 57,755,119–57,755,238, 120 basesExon 16: 57,755,345–57,755,494, 150 basesExon 17: 57,755,841–57,755,917, 77 basesExon 18: 57,755,992–57,756,066, 75 basesExon 19: 57,756,356–57,756,472, 117 basesExon 20: 57,756,814–57,757,244, 431 bases151015205′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.6 kb of the gene's 21.5 kb; 1,968 of those bases code for the protein.

How a genome test reads KATNB1

6

positions in KATNB1 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 21.5 kb of KATNB1, introns included, not only the 2.6 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). KATNB1 gene: katanin regulatory subunit B1. Retrieved 16 October 2026, from https://dantelabs.com/genes/katnb1

Vancouver

Dante Labs. KATNB1 gene: katanin regulatory subunit B1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/katnb1

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