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Gene

ANTXR1

ANTXR cell adhesion molecule 1

Summary

Cytogenetic location
2p13.3
Coordinates
Chromosome 2: 69,013,179–69,249,327 (GRCh38)
Exons
18 exons across 236.1 kb
Protein
564 amino acids
Also known as
TEM8, FLJ21776, FLJ10601, ATR
MANE Select transcript
ENST00000303714.9NM_032208.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads ANTXR1 yet. The test sequences your whole genome, so your data includes it all the same.

How ANTXR1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 2, with a bracket where ANTXR1 sits. ANTXR1 and 9 genes near it on chromosome 2, from 68,631,253 to 69,631,252.Chromosome 22p13.3p25.3p25.2p25.1p24.3p24.2p24.1p23.3p23.2p23.1p22.3p22.2p22.1p21p16.3p16.2p16.1p15p14p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13q14.1q14.2q14.3q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q31.1q31.2q31.3q32.1q32.2q32.3q33.1q33.2q33.3q34q35q36.1q36.2q36.3q37.1q37.2q37.368.8 Mb69 Mb69.2 Mb69.4 Mb69.6 MbAPLF: 68,467,561–68,655,862, forward strandAPLFPROKR1: 68,643,086–68,659,042, forward strandPROKR1ARHGAP25: 68,679,601–68,826,833, forward strandARHGAP25BMP10: 68,860,909–68,871,439, reverse strandBMP10GKN2: 68,938,776–68,953,028, reverse strandGKN2GKN1: 68,974,573–68,980,980, forward strandGKN1ANTXR1: 69,013,179–69,249,327, forward strandANTXR1GFPT1: 69,319,616–69,387,313, reverse strandGFPT1NFU1: 69,396,072–69,437,665, reverse strandNFU1AAK1: 69,457,559–69,674,349, reverse strandAAK1Diagram of ANTXR1: 18 exons on the forward strand of chromosome 2Exon 5: 1 known disease-causing siteExon 7: 1 known disease-causing siteExon 8: 1 known disease-causing siteExon 12: 1 known disease-causing siteExon 15: 1 known disease-causing siteExon 16: 1 known disease-causing siteExon 1: 69,013,179–69,013,651, 473 basesExon 2: 69,040,044–69,040,115, 72 basesExon 3: 69,044,742–69,044,813, 72 basesExon 4: 69,070,647–69,070,728, 82 basesExon 5: 69,071,754–69,071,787, 34 basesExon 6: 69,073,022–69,073,101, 80 basesExon 7: 69,075,590–69,075,658, 69 basesExon 8: 69,077,408–69,077,488, 81 basesExon 9: 69,090,859–69,090,919, 61 basesExon 10: 69,102,842–69,102,940, 99 basesExon 11: 69,123,017–69,123,086, 70 basesExon 12: 69,124,565–69,124,643, 79 basesExon 13: 69,152,169–69,152,264, 96 basesExon 14: 69,170,248–69,170,289, 42 basesExon 15: 69,181,786–69,181,881, 96 basesExon 16: 69,182,493–69,182,660, 168 basesExon 17: 69,193,335–69,193,415, 81 basesExon 18: 69,245,225–69,249,327, 4,103 bases151015185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 5.9 kb of the gene's 236.1 kb; 1,695 of those bases code for the protein.

How a genome test reads ANTXR1

7

positions in ANTXR1 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 236.1 kb of ANTXR1, introns included, not only the 5.9 kb of exons.

Traits linked to ANTXR1

The Human Phenotype Ontology lists these as features of the rare conditions ANTXR1 can cause. Each trait's page lists the other genes linked to it.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). ANTXR1 gene: ANTXR cell adhesion molecule 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/antxr1

Vancouver

Dante Labs. ANTXR1 gene: ANTXR cell adhesion molecule 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/antxr1

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