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Gene

SCARF2

scavenger receptor class F member 2

Summary

Cytogenetic location
22q11.21
Coordinates
Chromosome 22: 20,424,584–20,437,825 (GRCh38)
Exons
11 exons across 13.2 kb
Protein
866 amino acids
Also known as
SREC-II, SREC2, HUMZD58C02
MANE Select transcript
ENST00000622235.5NM_182895.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SCARF2 yet. The test sequences your whole genome, so your data includes it all the same.

How SCARF2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 22, with a bracket where SCARF2 sits. SCARF2 and 19 genes near it on chromosome 22, from 19,931,205 to 20,931,204.Chromosome 2222q11.21p13p12p11.2p11.1q11.1q11.21q11.22q11.23q12.1q12.2q12.3q13.1q13.2q13.31q13.32q13.3320 Mb20.2 Mb20.4 Mb20.6 Mb20.8 MbTXNRD2: 19,875,517–19,941,934, reverse strandTXNRD2COMT: 19,941,371–19,969,975, forward strandCOMTARVCF: 19,969,866–20,016,862, reverse strandARVCFTANGO2: 20,016,615–20,067,962, forward strandTANGO2DGCR8: 20,080,025–20,111,877, forward strandTRMT2A: 20,111,866–20,117,392, reverse strandTRMT2ARANBP1: 20,115,877–20,128,037, forward strandRANBP1ZDHHC8: 20,129,456–20,148,007, forward strandZDHHC8CCDC188: 20,146,381–20,151,059, reverse strandCCDC188RTN4R: 20,241,415–20,283,246, reverse strandRTN4RDGCR6L: 20,312,140–20,320,085, reverse strandDGCR6LZNF74: 20,394,115–20,409,406, forward strandZNF74SCARF2: 20,424,584–20,437,825, reverse strandSCARF2: 20,429,241–20,446,620, reverse strandKLHL22: 20,441,519–20,496,893, reverse strandKLHL22MED15: 20,495,913–20,587,632, forward strandMED15PI4KA: 20,707,691–20,859,417, reverse strandPI4KASERPIND1: 20,774,092–20,787,721, forward strandSERPIND1SNAP29: 20,858,537–20,891,218, forward strandSNAP29CRKL: 20,917,353–20,953,747, forward strandCRKLDiagram of SCARF2: 11 exons on the reverse strand of chromosome 22Exon 11: 1 known disease-causing siteExon 6: 1 known disease-causing siteExon 5: 1 known disease-causing siteExon 1: 2 known disease-causing sitesExon 11: 20,424,584–20,426,282, 1,699 basesExon 10: 20,427,398–20,427,550, 153 basesExon 9: 20,429,225–20,429,340, 116 basesExon 8: 20,429,536–20,429,653, 118 basesExon 7: 20,429,730–20,429,833, 104 basesExon 6: 20,430,429–20,430,557, 129 basesExon 5: 20,430,690–20,430,908, 219 basesExon 4: 20,431,018–20,431,537, 520 basesExon 3: 20,431,745–20,431,846, 102 basesExon 2: 20,431,930–20,431,988, 59 basesExon 1: 20,437,582–20,437,825, 244 bases1110864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.5 kb of the gene's 13.2 kb; 2,601 of those bases code for the protein.

How a genome test reads SCARF2

5

positions in SCARF2 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 13.2 kb of SCARF2, introns included, not only the 3.5 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). SCARF2 gene: scavenger receptor class F member 2. Retrieved 17 October 2026, from https://dantelabs.com/genes/scarf2

Vancouver

Dante Labs. SCARF2 gene: scavenger receptor class F member 2 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/scarf2

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