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Gene

ZNHIT3

zinc finger HIT-type containing 3

Summary

Cytogenetic location
17q12
Coordinates
Chromosome 17: 36,486,681–36,495,822 (GRCh38)
Exons
5 exons across 9.1 kb
Protein
155 amino acids
Also known as
Hit1
Previous symbols
TRIP3
MANE Select transcript
ENST00000617429.5NM_004773.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads ZNHIT3 yet. The test sequences your whole genome, so your data includes it all the same.

How ZNHIT3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
Chromosome 17, with a bracket where ZNHIT3 sits. ZNHIT3 and 20 genes near it on chromosome 17, from 35,991,252 to 36,991,251.Chromosome 1717q12p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.336 Mb36.2 Mb36.4 Mb36.6 Mb36.8 MbCCL15-CCL14: 35,983,656–36,001,621, reverse strandCCL15-CCL14CCL15: 35,988,463–36,002,119, reverse strandCCL15CCL23: 36,013,056–36,017,979, reverse strandCCL23CCL18: 36,064,228–36,072,032, forward strandCCL18CCL3: 36,088,256–36,090,169, reverse strandCCL3CCL4: 36,103,588–36,105,627, forward strandCCL4TBC1D3B: 36,165,683–36,176,636, reverse strandTBC1D3BCCL3L3: 36,194,869–36,196,758, reverse strandCCL3L3CCL4L2: 36,210,924–36,212,878, forward strandCCL4L2TBC1D3I: 36,253,456–36,264,570, reverse strandTBC1D3ITBC1D3G: 36,323,884–36,334,759, forward strandTBC1D3GTBC1D3H: 36,377,531–36,388,435, reverse strandTBC1D3HTBC1D3F: 36,428,612–36,439,566, reverse strandTBC1D3FZNHIT3: 36,486,681–36,495,822, forward strandZNHIT3MYO19: 36,495,118–36,545,889, reverse strandMYO19PIGW: 36,534,981–36,542,354, forward strandPIGWGGNBP2: 36,544,888–36,589,866, forward strandGGNBP2DHRS11: 36,591,782–36,600,809, forward strandDHRS11MRM1: 36,601,571–36,621,636, forward strandMRM1LHX1: 36,936,784–36,944,612, forward strandLHX1AATF: 36,948,925–37,056,874, forward strandAATFDiagram of ZNHIT3: 5 exons on the forward strand of chromosome 17Exon 1: 1 known disease-causing siteExon 2: 1 known disease-causing siteExon 4: 1 known disease-causing siteExon 1: 36,486,681–36,486,785, 105 basesExon 2: 36,486,935–36,486,966, 32 basesExon 3: 36,492,813–36,492,899, 87 basesExon 4: 36,493,926–36,494,006, 81 basesExon 5: 36,495,223–36,495,822, 600 bases123455′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 0.9 kb of the gene's 9.1 kb; 468 of those bases code for the protein.

How a genome test reads ZNHIT3

3

positions in ZNHIT3 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 9.1 kb of ZNHIT3, introns included, not only the 0.9 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). ZNHIT3 gene: zinc finger HIT-type containing 3. Retrieved 16 October 2026, from https://dantelabs.com/genes/znhit3

Vancouver

Dante Labs. ZNHIT3 gene: zinc finger HIT-type containing 3 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/znhit3

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