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Gene

TRPM3

transient receptor potential cation channel subfamily M member 3

Summary

Cytogenetic location
9q21.12-q21.13
Coordinates
Chromosome 9: 70,529,060–71,121,621 (GRCh38)
Exons
26 exons across 592.6 kb
Protein
1,719 amino acids
Also known as
KIAA1616, LTRPC3, GON-2
MANE Select transcript
ENST00000677713.2NM_001366145.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads TRPM3 yet. The test sequences your whole genome, so your data includes it all the same.

How TRPM3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 9, with a bracket where TRPM3 sits. TRPM3 and 4 genes near it on chromosome 9, from 69,936,498 to 71,714,183.Chromosome 99q21.12-q21.13p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.370 Mb70.5 Mb71 Mb71.5 MbMAMDC2: 70,043,516–70,226,987, forward strandMAMDC2SMC5: 70,258,270–70,354,874, forward strandSMC5KLF9: 70,384,586–70,414,657, reverse strandKLF9TRPM3: 70,529,060–71,121,621, reverse strandTRPM3CEMIP2: 71,681,395–71,816,690, reverse strandCEMIP2Diagram of TRPM3: 26 exons on the reverse strand of chromosome 9Exon 24: 1 known disease-causing siteExon 21: 1 known disease-causing siteExon 16: 1 known disease-causing siteExon 26: 70,529,060–70,537,405, 8,346 basesExon 25: 70,549,542–70,549,674, 133 basesExon 24: 70,552,844–70,553,043, 200 basesExon 23: 70,553,160–70,553,310, 151 basesExon 22: 70,591,031–70,591,205, 175 basesExon 21: 70,598,419–70,598,670, 252 basesExon 20: 70,603,342–70,603,470, 129 basesExon 19: 70,610,609–70,610,749, 141 basesExon 18: 70,615,908–70,616,075, 168 basesExon 17: 70,618,867–70,619,095, 229 basesExon 16: 70,620,076–70,620,365, 290 basesExon 15: 70,621,244–70,621,273, 30 basesExon 14: 70,625,191–70,625,331, 141 basesExon 13: 70,625,482–70,625,517, 36 basesExon 12: 70,635,211–70,635,261, 51 basesExon 11: 70,639,060–70,639,194, 135 basesExon 10: 70,640,560–70,640,660, 101 basesExon 9: 70,681,506–70,681,578, 73 basesExon 8: 70,761,601–70,761,724, 124 basesExon 7: 70,784,105–70,784,279, 175 basesExon 6: 70,827,847–70,828,018, 172 basesExon 5: 70,843,003–70,843,127, 125 basesExon 4: 70,846,378–70,846,591, 214 basesExon 3: 70,862,908–70,863,112, 205 basesExon 2: 70,864,432–70,864,511, 80 basesExon 1: 71,121,178–71,121,621, 444 bases2625201510515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 12.3 kb of the gene's 592.6 kb; 5,160 of those bases code for the protein.

How a genome test reads TRPM3

3

positions in TRPM3 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 592.6 kb of TRPM3, introns included, not only the 12.3 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). TRPM3 gene: transient receptor potential cation channel subfamily M member 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/trpm3

Vancouver

Dante Labs. TRPM3 gene: transient receptor potential cation channel subfamily M member 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/trpm3

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