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Gene

GATA5

GATA binding protein 5

Summary

Cytogenetic location
20q13.33
Coordinates
Chromosome 20: 62,463,497–62,475,995 (GRCh38)
Exons
7 exons across 12.5 kb
Protein
397 amino acids
Also known as
bB379O24.1, GATAS
MANE Select transcript
ENST00000252997.3NM_080473.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads GATA5 yet. The test sequences your whole genome, so your data includes it all the same.

How GATA5 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 20, with a bracket where GATA5 sits. GATA5 and 21 genes near it on chromosome 20, from 61,969,746 to 62,969,745.Chromosome 2020q13.33p13p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q12q13.11q13.12q13.13q13.2q13.31q13.32q13.3362 Mb62.2 Mb62.4 Mb62.6 Mb62.8 MbTAF4: 61,953,469–62,065,881, reverse strandTAF4LSM14B: 62,122,417–62,136,728, forward strandLSM14BPSMA7: 62,136,725–62,143,470, reverse strandPSMA7SS18L1: 62,143,606–62,182,514, forward strandSS18L1MTG2: 62,183,005–62,203,571, forward strandMTG2HRH3: 62,214,960–62,220,303, reverse strandHRH3OSBPL2: 62,231,922–62,296,213, forward strandOSBPL2ADRM1: 62,302,046–62,308,867, forward strandADRM1LAMA5: 62,307,955–62,367,333, reverse strandLAMA5RPS21: 62,365,598–62,388,680, forward strandRPS21CABLES2: 62,388,630–62,407,319, reverse strandCABLES2RBBP8NL: 62,410,143–62,427,548, reverse strandRBBP8NLGATA5: 62,463,497–62,475,995, reverse strandGATA5SLCO4A1: 62,642,440–62,685,785, forward strandSLCO4A1NTSR1: 62,708,427–62,762,771, forward strandNTSR1MRGBP: 62,796,452–62,801,729, forward strandMRGBPOGFR: 62,804,178–62,814,000, forward strandOGFRCOL9A3: 62,816,244–62,841,164, forward strandCOL9A3TCFL5: 62,840,997–62,861,840, reverse strandTCFL5DIDO1: 62,877,738–62,937,992, reverse strandDIDO1GID8: 62,937,060–62,948,589, forward strandGID8SLC17A9: 62,952,645–62,969,588, forward strandSLC17A9Diagram of GATA5: 7 exons on the reverse strand of chromosome 20Exon 7: 62,463,497–62,464,991, 1,495 basesExon 6: 62,465,340–62,465,464, 125 basesExon 5: 62,465,834–62,465,921, 88 basesExon 4: 62,466,426–62,466,551, 126 basesExon 3: 62,473,403–62,473,578, 176 basesExon 2: 62,474,999–62,475,542, 544 basesExon 1: 62,475,930–62,475,995, 66 bases76543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.6 kb of the gene's 12.5 kb; 1,194 of those bases code for the protein.

How a genome test reads GATA5

1

position in GATA5 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 12.5 kb of GATA5, introns included, not only the 2.6 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). GATA5 gene: GATA binding protein 5. Retrieved 16 October 2026, from https://dantelabs.com/genes/gata5

Vancouver

Dante Labs. GATA5 gene: GATA binding protein 5 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/gata5

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