Skip to content
Use your HSA or FSA funds

Gene

ZNF699

zinc finger protein 699

Summary

Cytogenetic location
19p13.2
Coordinates
Chromosome 19: 9,291,140–9,309,838 (GRCh38)
Exons
6 exons across 18.7 kb
Protein
642 amino acids
Also known as
FLJ38144
MANE Select transcript
ENST00000591998.6NM_198535.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads ZNF699 yet. The test sequences your whole genome, so your data includes it all the same.

How ZNF699 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 19, with a bracket where ZNF699 sits. ZNF699 and 21 genes near it on chromosome 19, from 8,800,489 to 9,800,488.Chromosome 1919p13.2p13.3p13.2p13.13p13.12p13.11p12p11q11q12q13.11q13.12q13.13q13.2q13.31q13.32q13.33q13.41q13.42q13.439 Mb9.2 Mb9.4 Mb9.6 Mb9.8 MbZNF558: 8,806,170–8,832,319, reverse strandZNF558MBD3L1: 8,832,365–8,843,340, forward strandMBD3L1MUC16: 8,848,638–9,010,438, reverse strandMUC16OR1M1: 9,087,061–9,095,669, forward strandOR1M1OR7G2: 9,100,407–9,107,475, reverse strandOR7G2OR7G1: 9,114,828–9,115,763, reverse strandOR7G1OR7G3: 9,126,012–9,126,950, reverse strandOR7G3ZNF317: 9,140,377–9,163,424, forward strandZNF317OR7D2: 9,178,979–9,188,818, forward strandOR7D2OR7D4: 9,210,276–9,219,589, reverse strandOR7D4OR7E24: 9,247,344–9,252,625, forward strandOR7E24ZNF699: 9,291,140–9,309,838, reverse strandZNF699ZNF559: 9,323,717–9,351,162, forward strandZNF559ZNF559-ZNF177: 9,324,174–9,382,617, forward strandZNF559-ZNF177ZNF177: 9,363,001–9,382,617, forward strandZNF177ZNF266: 9,412,210–9,435,601, reverse strandZNF266ZNF560: 9,464,959–9,498,626, reverse strandZNF560ZNF426: 9,523,223–9,538,826, reverse strandZNF426ZNF121: 9,560,329–9,584,545, reverse strandZNF121ZNF561: 9,590,381–9,622,601, reverse strandZNF561ZNF562: 9,641,807–9,675,106, reverse strandZNF562ZNF846: 9,749,546–9,793,180, reverse strandZNF846Diagram of ZNF699: 6 exons on the reverse strand of chromosome 19Exon 6: 3 known disease-causing sitesExon 5: 4 known disease-causing sitesExon 3: 1 known disease-causing siteExon 6: 9,291,140–9,296,933, 5,794 basesExon 5: 9,297,296–9,297,479, 184 basesExon 4: 9,297,880–9,297,990, 111 basesExon 3: 9,302,378–9,302,504, 127 basesExon 2: 9,305,072–9,305,124, 53 basesExon 1: 9,309,350–9,309,838, 489 bases6543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.8 kb of the gene's 18.7 kb; 1,929 of those bases code for the protein.

How a genome test reads ZNF699

9

positions in ZNF699 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 18.7 kb of ZNF699, introns included, not only the 6.8 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). ZNF699 gene: zinc finger protein 699. Retrieved 17 October 2026, from https://dantelabs.com/genes/znf699

Vancouver

Dante Labs. ZNF699 gene: zinc finger protein 699 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/znf699

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test