Trait

Intestinal atresia

An abnormal closure, or atresia of the tubular structure of the intestine.

Body system: Abnormality of the digestive system

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6 condition reports read genes linked to this trait

Dante Labs condition reports look at the genes behind groups of inherited conditions, read from one whole-genome test. Each page says which conditions and genes a report covers, how it is read and what it cannot tell you.

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10 genes linked to Intestinal atresia

Changes in these genes cause rare conditions in which Intestinal atresia is seen. Most people with this trait have none of those conditions, and a gene on this list says nothing about anyone's own genome.

Gene	How often it is seen	Conditions
CLMPCXADR like cell adhesion molecule	Always	In 1 condition
SONSON DNA and RNA binding protein	Always	In 1 condition
ITGA6integrin subunit alpha 6	Very often (80–99%)	In 1 condition
ITGB4integrin subunit beta 4	Very often (80–99%)	In 1 condition
PI4KAphosphatidylinositol 4-kinase alpha	Very often (80–99%)	In 2 conditions
TTC7Atetratricopeptide repeat domain 7A	Very often (80–99%)	In 2 conditions
ZNF699zinc finger protein 699	Often (30–79%)	In 1 condition
CHRM3cholinergic receptor muscarinic 3	Sometimes (5–29%)	In 1 condition
SIN3ASIN3 transcription regulator family member A	Sometimes (5–29%)	In 1 condition
SPINK5serine peptidase inhibitor Kazal type 5	Rarely (1–4%)	In 1 condition

How often is among people with one of the gene's conditions, the most often across them, as the Human Phenotype Ontology records it. These pages describe traits and the research behind them; they are not a diagnosis, and a doctor or genetic counsellor is the person to ask about symptoms.

Narrower traits

Broader traits

Abnormality of the intestine Gastrointestinal atresia

Where this comes from

The Human Phenotype Ontology, release 2026-09-01: the trait, its names, its definition and the genes linked to it. Find out more at hpo.jax.org.
Data release 2026.10.19-9814e911.

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