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Gene

SOX11

SRY-box transcription factor 11

Summary

Cytogenetic location
2p25.2
Coordinates
Chromosome 2: 5,692,384–5,701,385 (GRCh38)
Exons
1 exon across 9 kb
Protein
441 amino acids
MANE Select transcript
ENST00000322002.5NM_003108.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SOX11 yet. The test sequences your whole genome, so your data includes it all the same.

How SOX11 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
Chromosome 2, with a bracket where SOX11 sits. SOX11 and 0 genes near it on chromosome 2, from 5,196,885 to 6,196,884.Chromosome 22p25.2p25.3p25.2p25.1p24.3p24.2p24.1p23.3p23.2p23.1p22.3p22.2p22.1p21p16.3p16.2p16.1p15p14p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13q14.1q14.2q14.3q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q31.1q31.2q31.3q32.1q32.2q32.3q33.1q33.2q33.3q34q35q36.1q36.2q36.3q37.1q37.2q37.35.2 Mb5.4 Mb5.6 Mb5.8 Mb6 MbSOX11: 5,692,384–5,701,385, forward strandSOX11Diagram of SOX11: one exon on the forward strand of chromosome 2Exon 1: 48 known disease-causing sitesExon 1: 5,692,384–5,701,385, 9,002 bases15′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 9 kb of the gene's 9 kb; 1,326 of those bases code for the protein.

How a genome test reads SOX11

48

positions in SOX11 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 9 kb of SOX11, introns included, not only the 9 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). SOX11 gene: SRY-box transcription factor 11. Retrieved 17 October 2026, from https://dantelabs.com/genes/sox11

Vancouver

Dante Labs. SOX11 gene: SRY-box transcription factor 11 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/sox11

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