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Gene

ATXN7L3

ataxin 7 like 3

Summary

Cytogenetic location
17q21.31
Coordinates
Chromosome 17: 44,191,805–44,199,884 (GRCh38)
Exons
13 exons across 8.1 kb
Protein
347 amino acids
Also known as
DKFZp761G2113
MANE Select transcript
ENST00000587097.6NM_001382309.1
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads ATXN7L3 yet. The test sequences your whole genome, so your data includes it all the same.

How ATXN7L3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 17, with a bracket where ATXN7L3 sits. ATXN7L3 and 27 genes near it on chromosome 17, from 43,695,845 to 44,695,844.Chromosome 1717q21.31p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.343.8 Mb44 Mb44.2 Mb44.4 Mb44.6 MbSOST: 43,753,738–43,758,791, reverse strandSOSTDUSP3: 43,763,629–43,779,000, reverse strandDUSP3CFAP97D1: 43,780,426–43,787,620, forward strandCFAP97D1MPP3: 43,800,795–43,833,203, reverse strandMPP3CD300LG: 43,847,114–43,863,639, forward strandCD300LGMPP2: 43,875,352–43,909,711, reverse strandMPP2PPY: 43,940,804–43,952,444, reverse strandPPYPYY: 43,952,733–44,004,469, reverse strandPYYNAGS: 44,004,581–44,011,213, forward strandNAGSTMEM101: 44,008,986–44,023,946, reverse strandTMEM101LSM12: 44,033,931–44,067,619, reverse strandLSM12G6PC3: 44,070,620–44,094,678, forward strandG6PC3HDAC5: 44,076,746–44,123,702, reverse strandHDAC5HROB: 44,141,903–44,162,481, forward strandHROBASB16: 44,170,447–44,179,373, forward strandASB16TMUB2: 44,186,955–44,191,931, forward strandTMUB2ATXN7L3: 44,191,805–44,199,884, reverse strandATXN7L3UBTF: 44,205,033–44,221,626, reverse strandUBTFSLC4A1: 44,248,390–44,268,162, reverse strandSLC4A1RUNDC3A: 44,307,945–44,318,675, forward strandRUNDC3ASLC25A39: 44,316,821–44,326,639, reverse strandSLC25A39GRN: 44,345,108–44,353,106, forward strandGRNFAM171A2: 44,353,215–44,363,875, reverse strandFAM171A2ITGA2B: 44,372,177–44,389,649, reverse strandITGA2BGPATCH8: 44,395,281–44,503,639, reverse strandGPATCH8FZD2: 44,557,484–44,561,262, forward strandFZD2MEIOC: 44,656,363–44,690,308, forward strandMEIOCCCDC43: 44,671,063–44,689,831, reverse strandCCDC43Diagram of ATXN7L3: 13 exons on the reverse strand of chromosome 17Exon 4: 1 known disease-causing siteExon 13: 44,191,805–44,194,411, 2,607 basesExon 12: 44,194,517–44,194,674, 158 basesExon 11: 44,194,768–44,194,839, 72 basesExon 10: 44,195,097–44,195,140, 44 basesExon 9: 44,195,419–44,195,487, 69 basesExon 8: 44,195,800–44,195,828, 29 basesExon 7: 44,196,034–44,196,079, 46 basesExon 6: 44,196,396–44,196,418, 23 basesExon 5: 44,196,929–44,197,026, 98 basesExon 4: 44,197,228–44,197,399, 172 basesExon 3: 44,197,598–44,197,730, 133 basesExon 2: 44,198,020–44,198,130, 111 basesExon 1: 44,199,496–44,199,884, 389 bases131211109876543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4 kb of the gene's 8.1 kb; 1,044 of those bases code for the protein.

How a genome test reads ATXN7L3

1

position in ATXN7L3 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 8.1 kb of ATXN7L3, introns included, not only the 4 kb of exons.

Traits linked to ATXN7L3

The Human Phenotype Ontology lists these as features of the rare conditions ATXN7L3 can cause. Each trait's page lists the other genes linked to it.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). ATXN7L3 gene: ataxin 7 like 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/atxn7l3

Vancouver

Dante Labs. ATXN7L3 gene: ataxin 7 like 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/atxn7l3

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