Skip to content
Use your HSA or FSA funds

Gene

VPS35L

VPS35 endosomal protein sorting factor like

Summary

Cytogenetic location
16p12.3
Coordinates
Chromosome 16: 19,555,703–19,701,163 (GRCh38)
Exons
31 exons across 145.5 kb
Protein
963 amino acids
Also known as
MGC16824
Previous symbols
C16orf62
MANE Select transcript
ENST00000417362.7NM_020314.7
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads VPS35L yet. The test sequences your whole genome, so your data includes it all the same.

How VPS35L is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 16, with a bracket where VPS35L sits. VPS35L and 9 genes near it on chromosome 16, from 19,128,433 to 20,128,432.Chromosome 1616p12.3p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.319.2 Mb19.4 Mb19.6 Mb19.8 Mb20 MbSYT17: 19,167,971–19,268,334, forward strandSYT17CLEC19A: 19,285,731–19,322,145, forward strandCLEC19ATMC5: 19,410,428–19,499,117, forward strandTMC5GDE1: 19,501,681–19,522,132, reverse strandGDE1CCP110: 19,523,808–19,553,408, forward strandCCP110VPS35L: 19,555,703–19,701,163, forward strandVPS35LKNOP1: 19,657,344–19,718,751, reverse strandKNOP1IQCK: 19,716,456–19,858,467, forward strandIQCKGPRC5B: 19,856,691–19,886,173, reverse strandGPRC5BGPR139: 20,028,239–20,073,890, reverse strandGPR139Diagram of VPS35L: 31 exons on the forward strand of chromosome 16Exon 10: 1 known disease-causing siteExon 12: 1 known disease-causing siteExon 24: 1 known disease-causing siteExon 1: 19,555,703–19,555,746, 44 basesExon 2: 19,564,851–19,564,950, 100 basesExon 3: 19,569,424–19,569,591, 168 basesExon 4: 19,573,119–19,573,241, 123 basesExon 5: 19,575,098–19,575,122, 25 basesExon 6: 19,579,052–19,579,128, 77 basesExon 7: 19,581,525–19,581,653, 129 basesExon 8: 19,591,790–19,591,874, 85 basesExon 9: 19,601,664–19,601,723, 60 basesExon 10: 19,608,178–19,608,274, 97 basesExon 11: 19,608,974–19,609,021, 48 basesExon 12: 19,610,322–19,610,415, 94 basesExon 13: 19,616,114–19,616,191, 78 basesExon 14: 19,616,686–19,616,808, 123 basesExon 15: 19,626,177–19,626,223, 47 basesExon 16: 19,627,694–19,627,805, 112 basesExon 17: 19,628,637–19,628,753, 117 basesExon 18: 19,629,767–19,629,820, 54 basesExon 19: 19,633,092–19,633,172, 81 basesExon 20: 19,637,594–19,637,656, 63 basesExon 21: 19,640,015–19,640,100, 86 basesExon 22: 19,642,396–19,642,476, 81 basesExon 23: 19,644,886–19,644,949, 64 basesExon 24: 19,647,784–19,647,882, 99 basesExon 25: 19,650,382–19,650,459, 78 basesExon 26: 19,651,976–19,652,090, 115 basesExon 27: 19,669,160–19,669,299, 140 basesExon 28: 19,682,225–19,682,390, 166 basesExon 29: 19,691,353–19,691,471, 119 basesExon 30: 19,699,502–19,699,648, 147 basesExon 31: 19,700,378–19,701,163, 786 bases120315′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.6 kb of the gene's 145.5 kb; 2,892 of those bases code for the protein.

How a genome test reads VPS35L

3

positions in VPS35L where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 145.5 kb of VPS35L, introns included, not only the 3.6 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). VPS35L gene: VPS35 endosomal protein sorting factor like. Retrieved 17 October 2026, from https://dantelabs.com/genes/vps35l

Vancouver

Dante Labs. VPS35L gene: VPS35 endosomal protein sorting factor like [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/vps35l

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test