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Gene

PTPMT1

protein tyrosine phosphatase mitochondrial 1

Summary

Cytogenetic location
11p11.2
Coordinates
Chromosome 11: 47,565,599–47,573,461 (GRCh38)
Exons
4 exons across 7.9 kb
Protein
201 amino acids
Also known as
PLIP, DUSP23, MOSP
MANE Select transcript
ENST00000326674.10NM_175732.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PTPMT1 yet. The test sequences your whole genome, so your data includes it all the same.

How PTPMT1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 11, with a bracket where PTPMT1 sits. PTPMT1 and 22 genes near it on chromosome 11, from 47,069,530 to 48,069,529.Chromosome 1111p11.2p15.5p15.4p15.3p15.2p15.1p14.3p14.2p14.1p13p12p11.2p11.12p11.11q11q12.1q12.2q12.3q13.1q13.2q13.3q13.4q13.5q14.1q14.2q14.3q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q2547.2 Mb47.4 Mb47.6 Mb47.8 Mb48 MbCSTPP1: 46,936,689–47,165,535, forward strandCSTPP1ARFGAP2: 47,135,667–47,177,474, reverse strandARFGAP2PACSIN3: 47,177,511–47,187,487, reverse strandPACSIN3DDB2: 47,214,435–47,240,555, forward strandDDB2ACP2: 47,237,598–47,249,288, reverse strandACP2NR1H3: 47,248,300–47,269,131, forward strandNR1H3MADD: 47,269,161–47,330,038, forward strandMADDMYBPC3: 47,331,406–47,352,702, reverse strandMYBPC3SPI1: 47,354,860–47,409,369, reverse strandSPI1SLC39A13: 47,407,132–47,416,587, forward strandSLC39A13PSMC3: 47,418,765–47,426,488, reverse strandPSMC3RAPSN: 47,436,816–47,449,192, reverse strandRAPSNCELF1: 47,465,933–47,565,569, reverse strandNDUFS3: 47,565,336–47,584,565, forward strandNDUFS3PTPMT1: 47,565,599–47,573,461, forward strandPTPMT1KBTBD4: 47,572,196–47,578,982, reverse strandKBTBD4FAM180B: 47,586,207–47,589,195, forward strandFAM180BC1QTNF4: 47,589,666–47,595,642, reverse strandMTCH2: 47,604,339–47,642,698, reverse strandAGBL2: 47,659,591–47,715,389, reverse strandAGBL2FNBP4: 47,716,494–47,767,460, reverse strandFNBP4NUP160: 47,777,872–47,848,561, reverse strandNUP160PTPRJ: 47,980,414–48,170,839, forward strandPTPRJDiagram of PTPMT1: 4 exons on the forward strand of chromosome 11Exon 1: 47,565,599–47,565,796, 198 basesExon 2: 47,565,906–47,565,986, 81 basesExon 3: 47,569,700–47,569,891, 192 basesExon 4: 47,571,471–47,573,461, 1,991 bases12345′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.5 kb of the gene's 7.9 kb; 606 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). PTPMT1 gene: protein tyrosine phosphatase mitochondrial 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/ptpmt1

Vancouver

Dante Labs. PTPMT1 gene: protein tyrosine phosphatase mitochondrial 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ptpmt1

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