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Gene

TXNL4A

thioredoxin like 4A

Summary

Cytogenetic location
18q23
Coordinates
Chromosome 18: 79,970,813–79,988,563 (GRCh38)
Exons
3 exons across 17.8 kb
Protein
142 amino acids
Also known as
U5-15kD, DIM1, HsT161, DIB1, SNRNP15
Previous symbols
TXNL4
MANE Select transcript
ENST00000269601.10NM_006701.5
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads TXNL4A yet. The test sequences your whole genome, so your data includes it all the same.

How TXNL4A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 18, with a bracket where TXNL4A sits. TXNL4A and 9 genes near it on chromosome 18, from 79,479,688 to 80,479,687.Chromosome 1818q23p11.32p11.31p11.23p11.22p11.21p11.1q11.1q11.2q12.1q12.2q12.3q21.1q21.2q21.31q21.32q21.33q22.1q22.2q22.3q2379.6 Mb79.8 Mb80 Mb80.2 Mb80.4 MbNFATC1: 79,395,856–79,531,338, forward strandNFATC1CTDP1: 79,679,781–79,756,608, forward strandCTDP1KCNG2: 79,797,904–79,900,184, forward strandKCNG2SLC66A2: 79,901,157–79,951,677, reverse strandSLC66A2HSBP1L1: 79,964,582–79,970,823, forward strandHSBP1L1TXNL4A: 79,970,813–79,988,563, reverse strandTXNL4A: 80,034,346–80,097,088, forward strandRBFA: 80,034,389–80,050,651, forward strandRBFAADNP2: 80,109,262–80,147,523, forward strandADNP2PARD6G: 80,157,232–80,247,594, reverse strandPARD6GDiagram of TXNL4A: 3 exons on the reverse strand of chromosome 18Exon 3: 2 known disease-causing sitesExon 1: 1 known disease-causing siteExon 3: 79,970,813–79,973,856, 3,044 basesExon 2: 79,977,598–79,977,701, 104 basesExon 1: 79,988,240–79,988,563, 324 bases3215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.5 kb of the gene's 17.8 kb; 429 of those bases code for the protein.

Sequencing TXNL4A

2Low

How hard TXNL4A is to sequence with short reads, out of 100

  • Mappability0.6%
  • Homology0%
  • Repeats1.5%
  • GC content15%
  • Reference coverage0%

5

positions in TXNL4A where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 17.8 kb of TXNL4A, introns included, not only the 3.5 kb of exons.

Traits linked to TXNL4A

The Human Phenotype Ontology lists these as features of the rare conditions TXNL4A can cause. Each trait's page lists the other genes linked to it.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.17-8666dff2.

Cite this page

APA

Dante Labs. (n.d.). TXNL4A gene: thioredoxin like 4A. Retrieved 17 October 2026, from https://dantelabs.com/genes/txnl4a

Vancouver

Dante Labs. TXNL4A gene: thioredoxin like 4A [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/txnl4a

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