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Gene

JARID2

jumonji and AT-rich interaction domain containing 2

Summary

Cytogenetic location
6p22.3
Coordinates
Chromosome 6: 15,246,069–15,522,042 (GRCh38)
Exons
18 exons across 276 kb
Protein
1,246 amino acids
Previous symbols
JMJ
MANE Select transcript
ENST00000341776.7NM_004973.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads JARID2 yet. The test sequences your whole genome, so your data includes it all the same.

How JARID2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 6, with a bracket where JARID2 sits. JARID2 and 1 gene near it on chromosome 6, from 14,884,056 to 15,884,055.Chromosome 66p22.3p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q2715 Mb15.2 Mb15.4 Mb15.6 Mb15.8 MbJARID2: 15,246,069–15,522,042, forward strandJARID2DTNBP1: 15,520,284–15,663,066, reverse strandDTNBP1Diagram of JARID2: 18 exons on the forward strand of chromosome 6Exon 4: 1 known disease-causing siteExon 7: 4 known disease-causing sitesExon 14: 2 known disease-causing sitesExon 16: 1 known disease-causing siteExon 1: 15,246,069–15,246,584, 516 basesExon 2: 15,374,117–15,374,252, 136 basesExon 3: 15,410,224–15,410,365, 142 basesExon 4: 15,452,006–15,452,175, 170 basesExon 5: 15,468,542–15,468,718, 177 basesExon 6: 15,487,307–15,487,542, 236 basesExon 7: 15,496,132–15,497,170, 1,039 basesExon 8: 15,500,907–15,501,409, 503 basesExon 9: 15,504,500–15,504,592, 93 basesExon 10: 15,507,136–15,507,254, 119 basesExon 11: 15,507,346–15,507,416, 71 basesExon 12: 15,508,340–15,508,454, 115 basesExon 13: 15,511,296–15,511,401, 106 basesExon 14: 15,512,208–15,512,390, 183 basesExon 15: 15,512,915–15,513,045, 131 basesExon 16: 15,513,239–15,513,422, 184 basesExon 17: 15,517,161–15,517,268, 108 basesExon 18: 15,520,069–15,522,042, 1,974 bases110185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6 kb of the gene's 276 kb; 3,741 of those bases code for the protein.

How a genome test reads JARID2

10

positions in JARID2 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 276 kb of JARID2, introns included, not only the 6 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). JARID2 gene: jumonji and AT-rich interaction domain containing 2. Retrieved 16 October 2026, from https://dantelabs.com/genes/jarid2

Vancouver

Dante Labs. JARID2 gene: jumonji and AT-rich interaction domain containing 2 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/jarid2

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