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Gene

CCDC22

CCC complex scaffolding subunit CCDC22

Summary

Cytogenetic location
Xp11.23
Coordinates
Chromosome X: 49,235,470–49,250,520 (GRCh38)
Exons
17 exons across 15.1 kb
Protein
627 amino acids
Also known as
JM1
Previous symbols
CXorf37
MANE Select transcript
ENST00000376227.4NM_014008.5
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads CCDC22 yet. The test sequences your whole genome, so your data includes it all the same.

How CCDC22 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome X, with a bracket where CCDC22 sits. CCDC22 and 40 genes near it on chromosome X, from 48,742,995 to 49,742,994.Chromosome XXp11.23p22.33p22.32p22.31p22.2p22.13p22.12p22.11p21.3p21.2p21.1p11.4p11.3p11.23p11.22p11.21p11.1q11.1q11.2q12q13.1q13.2q13.3q21.1q21.2q21.31q21.32q21.33q22.1q22.2q22.3q23q24q25q26.1q26.2q26.3q27.1q27.2q27.3q2848.8 Mb49 Mb49.2 Mb49.4 Mb49.6 MbGLOD5: 48,761,744–48,773,648, forward strandGLOD5GATA1: 48,783,122–48,794,311, forward strandGATA1HDAC6: 48,801,372–48,824,986, forward strandHDAC6ERAS: 48,826,513–48,830,138, forward strandERASPCSK1N: 48,831,088–48,835,632, reverse strandPCSK1NTIMM17B: 48,880,274–48,898,143, reverse strandPQBP1: 48,890,197–48,903,640, forward strandPQBP1SLC35A2: 48,903,180–48,911,958, reverse strandSLC35A2PIM2: 48,913,172–48,919,546, reverse strandPIM2OTUD5: 48,922,024–48,958,390, reverse strandOTUD5KCND1: 48,960,982–48,971,916, reverse strandKCND1GRIPAP1: 48,973,719–49,002,265, reverse strandGRIPAP1TFE3: 49,028,726–49,043,512, reverse strandTFE3CCDC120: 49,053,463–49,073,357, forward strandCCDC120PRAF2: 49,070,107–49,074,022, reverse strandPRAF2: 49,071,470–49,079,887, reverse strandWDR45: 49,074,431–49,101,203, reverse strandWDR45GPKOW: 49,112,941–49,123,750, reverse strandGPKOWMAGIX: 49,162,564–49,169,931, forward strandPLP2: 49,171,787–49,175,387, forward strandPLP2PRICKLE3: 49,174,802–49,186,528, reverse strandPRICKLE3SYP: 49,187,807–49,200,218, reverse strandSYPCACNA1F: 49,205,063–49,233,371, reverse strandCACNA1FCCDC22: 49,235,470–49,250,520, forward strandCCDC22FOXP3: 49,250,436–49,264,800, reverse strandFOXP3: 49,258,343–49,270,477, reverse strandPPP1R3F: 49,269,771–49,301,468, forward strandGAGE10: 49,303,645–49,319,844, forward strandGAGE10GAGE12J: 49,322,037–49,329,387, forward strandGAGE12JGAGE13: 49,331,575–49,338,952, forward strandGAGE13GAGE2E: 49,341,192–49,345,922, forward strandGAGE2EGAGE12B: 49,529,869–49,529,985, forward strandGAGE12BGAGE12C: 49,532,177–49,539,541, forward strandGAGE12CGAGE12D: 49,541,733–49,549,097, forward strandGAGE12DGAGE12E: 49,551,289–49,558,645, forward strandGAGE12EGAGE12F: 49,560,842–49,568,209, forward strandGAGE12G: 49,570,400–49,577,757, forward strandGAGE12H: 49,579,945–49,587,304, forward strandGAGE2A: 49,589,476–49,596,834, forward strandGAGE1: 49,599,020–49,608,538, forward strandGAGE1PAGE1: 49,687,445–49,696,024, reverse strandPAGE1Diagram of CCDC22: 17 exons on the forward strand of chromosome XExon 1: 49,235,470–49,235,686, 217 basesExon 2: 49,237,086–49,237,263, 178 basesExon 3: 49,242,016–49,242,148, 133 basesExon 4: 49,242,886–49,242,992, 107 basesExon 5: 49,243,118–49,243,184, 67 basesExon 6: 49,243,284–49,243,462, 179 basesExon 7: 49,246,731–49,246,925, 195 basesExon 8: 49,247,496–49,247,558, 63 basesExon 9: 49,247,649–49,247,768, 120 basesExon 10: 49,248,191–49,248,310, 120 basesExon 11: 49,248,407–49,248,523, 117 basesExon 12: 49,248,633–49,248,734, 102 basesExon 13: 49,248,817–49,248,924, 108 basesExon 14: 49,249,167–49,249,262, 96 basesExon 15: 49,249,509–49,249,568, 60 basesExon 16: 49,249,651–49,249,725, 75 basesExon 17: 49,250,148–49,250,520, 373 bases1246810121416175′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.3 kb of the gene's 15.1 kb; 1,884 of those bases code for the protein.

Traits linked to CCDC22

The Human Phenotype Ontology lists these as features of the rare conditions CCDC22 can cause. Each trait's page lists the other genes linked to it.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). CCDC22 gene: CCC complex scaffolding subunit CCDC22. Retrieved 18 October 2026, from https://dantelabs.com/genes/ccdc22

Vancouver

Dante Labs. CCDC22 gene: CCC complex scaffolding subunit CCDC22 [Internet]. [cited 18 October 2026]. Available from: https://dantelabs.com/genes/ccdc22

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