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Gene

SYNCRIP

synaptotagmin binding cytoplasmic RNA interacting protein

Summary

Cytogenetic location
6q14.3
Coordinates
Chromosome 6: 85,613,976–85,642,886 (GRCh38)
Exons
11 exons across 28.9 kb
Protein
623 amino acids
Also known as
NSAP1, GRY-RBP, dJ3J17.2, HNRPQ1, hnRNP-Q, HNRNPQ
MANE Select transcript
ENST00000369622.8NM_006372.5
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SYNCRIP yet. The test sequences your whole genome, so your data includes it all the same.

How SYNCRIP is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 6, with a bracket where SYNCRIP sits. SYNCRIP and 3 genes near it on chromosome 6, from 85,128,431 to 86,128,430.Chromosome 66q14.3p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q2785.2 Mb85.4 Mb85.6 Mb85.8 Mb86 MbNT5E: 85,449,584–85,547,684, forward strandNT5E: 85,504,776–85,678,733, reverse strandSNX14: 85,504,776–85,594,156, reverse strandSNX14SYNCRIP: 85,613,976–85,642,886, reverse strandSYNCRIPDiagram of SYNCRIP: 11 exons on the reverse strand of chromosome 6Exon 11: 1 known disease-causing siteExon 11: 85,613,976–85,615,347, 1,372 basesExon 10: 85,618,818–85,618,939, 122 basesExon 9: 85,619,268–85,619,417, 150 basesExon 8: 85,622,482–85,622,687, 206 basesExon 7: 85,623,977–85,624,112, 136 basesExon 6: 85,636,967–85,637,143, 177 basesExon 5: 85,637,243–85,637,356, 114 basesExon 4: 85,640,221–85,640,328, 108 basesExon 3: 85,640,446–85,640,564, 119 basesExon 2: 85,641,292–85,641,451, 160 basesExon 1: 85,642,797–85,642,886, 90 bases1110864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.8 kb of the gene's 28.9 kb; 1,872 of those bases code for the protein.

How a genome test reads SYNCRIP

1

position in SYNCRIP where ClinVar classes a change as pathogenic or likely pathogenic

1 of them (100%) falls in a region short reads find hard.

  • Low mappability (1 site)Regions where 100 bp or 250 bp reads cannot be placed uniquely.

A whole genome covers all 28.9 kb of SYNCRIP, introns included, not only the 2.8 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). SYNCRIP gene: synaptotagmin binding cytoplasmic RNA interacting protein. Retrieved 16 October 2026, from https://dantelabs.com/genes/syncrip

Vancouver

Dante Labs. SYNCRIP gene: synaptotagmin binding cytoplasmic RNA interacting protein [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/syncrip

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