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Gene

SLC6A11

solute carrier family 6 member 11

Summary

Cytogenetic location
3p25.3
Coordinates
Chromosome 3: 10,816,228–10,940,714 (GRCh38)
Exons
14 exons across 124.5 kb
Protein
632 amino acids
Also known as
GAT3
MANE Select transcript
ENST00000254488.7NM_014229.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SLC6A11 yet. The test sequences your whole genome, so your data includes it all the same.

How SLC6A11 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 3, with a bracket where SLC6A11 sits. SLC6A11 and 4 genes near it on chromosome 3, from 10,378,471 to 11,378,470.Chromosome 33p25.3p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q2910.4 Mb10.6 Mb10.8 Mb11 Mb11.2 MbATP2B2: 10,324,023–10,708,060, reverse strandATP2B2SLC6A11: 10,816,228–10,940,714, forward strandSLC6A11SLC6A1: 10,992,177–11,039,247, forward strandSLC6A1HRH1: 11,137,093–11,263,731, forward strandHRH1ATG7: 11,272,309–11,557,665, forward strandATG7Diagram of SLC6A11: 14 exons on the forward strand of chromosome 3Exon 1: 10,816,228–10,816,521, 294 basesExon 2: 10,819,465–10,819,599, 135 basesExon 3: 10,819,712–10,819,852, 141 basesExon 4: 10,823,302–10,823,392, 91 basesExon 5: 10,844,214–10,844,346, 133 basesExon 6: 10,874,961–10,875,095, 135 basesExon 7: 10,912,090–10,912,193, 104 basesExon 8: 10,918,329–10,918,453, 125 basesExon 9: 10,926,004–10,926,116, 113 basesExon 10: 10,929,202–10,929,339, 138 basesExon 11: 10,933,151–10,933,253, 103 basesExon 12: 10,934,066–10,934,166, 101 basesExon 13: 10,935,029–10,935,199, 171 basesExon 14: 10,938,250–10,940,714, 2,465 bases124681012145′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.2 kb of the gene's 124.5 kb; 1,899 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). SLC6A11 gene: solute carrier family 6 member 11. Retrieved 17 October 2026, from https://dantelabs.com/genes/slc6a11

Vancouver

Dante Labs. SLC6A11 gene: solute carrier family 6 member 11 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/slc6a11

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