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Gene

SLC30A9

solute carrier family 30 member 9

Summary

Cytogenetic location
4p13
Coordinates
Chromosome 4: 41,990,530–42,090,461 (GRCh38)
Exons
18 exons across 99.9 kb
Protein
568 amino acids
Also known as
HUEL, ZNT9, GAC63
Previous symbols
C4orf1
MANE Select transcript
ENST00000264451.12NM_006345.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads SLC30A9 yet. The test sequences your whole genome, so your data includes it all the same.

How SLC30A9 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 4, with a bracket where SLC30A9 sits. SLC30A9 and 7 genes near it on chromosome 4, from 41,540,496 to 42,540,495.Chromosome 44p13p16.3p16.2p16.1p15.33p15.32p15.31p15.2p15.1p14p13p12p11q11q12q13.1q13.2q13.3q21.1q21.21q21.22q21.23q21.3q22.1q22.2q22.3q23q24q25q26q27q28.1q28.2q28.3q31.1q31.21q31.22q31.23q31.3q32.1q32.2q32.3q33q34.1q34.2q34.3q35.1q35.241.6 Mb41.8 Mb42 Mb42.2 Mb42.4 MbLIMCH1: 41,359,574–41,700,049, forward strandLIMCH1PHOX2B: 41,744,082–41,748,887, reverse strandPHOX2BTMEM33: 41,934,380–41,960,803, forward strandTMEM33DCAF4L1: 41,981,756–41,986,465, forward strandDCAF4L1SLC30A9: 41,990,530–42,090,461, forward strandSLC30A9BEND4: 42,110,853–42,152,878, reverse strandBEND4SHISA3: 42,397,348–42,402,487, forward strandSHISA3ATP8A1: 42,408,373–42,657,144, reverse strandATP8A1Diagram of SLC30A9: 18 exons on the forward strand of chromosome 4Exon 1: 2 known disease-causing sitesExon 2: 1 known disease-causing siteExon 6: 1 known disease-causing siteExon 12: 1 known disease-causing siteExon 15: 1 known disease-causing siteExon 1: 41,990,530–41,990,760, 231 basesExon 2: 42,001,616–42,001,780, 165 basesExon 3: 42,018,111–42,018,170, 60 basesExon 4: 42,020,416–42,020,515, 100 basesExon 5: 42,022,838–42,022,930, 93 basesExon 6: 42,023,302–42,023,384, 83 basesExon 7: 42,035,275–42,035,333, 59 basesExon 8: 42,038,986–42,039,053, 68 basesExon 9: 42,049,377–42,049,479, 103 basesExon 10: 42,060,191–42,060,246, 56 basesExon 11: 42,062,986–42,063,121, 136 basesExon 12: 42,065,310–42,065,349, 40 basesExon 13: 42,066,550–42,066,621, 72 basesExon 14: 42,067,085–42,067,192, 108 basesExon 15: 42,070,526–42,070,691, 166 basesExon 16: 42,075,657–42,075,786, 130 basesExon 17: 42,078,212–42,078,325, 114 basesExon 18: 42,086,082–42,090,461, 4,380 bases151015185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.2 kb of the gene's 99.9 kb; 1,707 of those bases code for the protein.

How a genome test reads SLC30A9

8

positions in SLC30A9 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 99.9 kb of SLC30A9, introns included, not only the 6.2 kb of exons.

Traits linked to SLC30A9

The Human Phenotype Ontology lists these as features of the rare conditions SLC30A9 can cause. Each trait's page lists the other genes linked to it.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). SLC30A9 gene: solute carrier family 30 member 9. Retrieved 17 October 2026, from https://dantelabs.com/genes/slc30a9

Vancouver

Dante Labs. SLC30A9 gene: solute carrier family 30 member 9 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/slc30a9

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