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Gene

SMARCD2

SWI/SNF related BAF chromatin remodeling complex subunit D2

Summary

Cytogenetic location
17q23.3
Coordinates
Chromosome 17: 63,832,081–63,842,685 (GRCh38)
Exons
13 exons across 10.6 kb
Protein
531 amino acids
Also known as
BAF60B, Rsc6p, CRACD2, PRO2451
MANE Select transcript
ENST00000448276.7NM_001098426.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SMARCD2 yet. The test sequences your whole genome, so your data includes it all the same.

How SMARCD2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
Chromosome 17, with a bracket where SMARCD2 sits. SMARCD2 and 29 genes near it on chromosome 17, from 63,337,383 to 64,337,382.Chromosome 1717q23.3p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.363.4 Mb63.6 Mb63.8 Mb64 Mb64.2 MbTANC2: 62,966,201–63,427,703, forward strandTANC2CYB561: 63,432,298–63,447,108, reverse strandCYB561ACE: 63,477,058–63,498,380, forward strandACE: 63,484,823–63,521,848, forward strandKCNH6: 63,523,310–63,548,987, forward strandKCNH6DCAF7: 63,550,222–63,594,286, forward strandDCAF7: 63,550,603–63,608,347, forward strandTACO1: 63,600,879–63,612,023, forward strandTACO1MAP3K3: 63,622,379–63,696,310, forward strandMAP3K3STRADA: 63,682,336–63,742,005, reverse strandSTRADALIMD2: 63,695,883–63,701,183, reverse strandLIMD2: 63,702,845–63,752,097, reverse strandCCDC47: 63,745,250–63,776,351, reverse strandCCDC47DDX42: 63,773,603–63,820,451, forward strandDDX42FTSJ3: 63,819,113–63,830,012, reverse strandFTSJ3PSMC5: 63,827,082–63,832,244, forward strandPSMC5SMARCD2: 63,832,081–63,842,685, reverse strandSMARCD2CSH2: 63,872,007–63,873,769, reverse strandCSH2GH2: 63,880,205–63,881,970, reverse strandGH2CSH1: 63,894,906–63,896,667, reverse strandCSH1CSHL1: 63,909,596–63,911,348, reverse strandCSHL1GH1: 63,917,200–63,918,839, reverse strandGH1: 63,917,203–63,931,385, reverse strandCD79B: 63,928,738–63,932,629, reverse strandSCN4A: 63,938,554–63,972,918, reverse strandPRR29: 63,998,344–64,004,305, forward strandPRR29ICAM2: 64,002,594–64,020,640, reverse strandICAM2ERN1: 64,039,080–64,130,819, reverse strandERN1TEX2: 64,147,227–64,263,293, reverse strandTEX2PECAM1: 64,319,415–64,431,594, reverse strandPECAM1Diagram of SMARCD2: 13 exons on the reverse strand of chromosome 17Exon 11: 1 known disease-causing siteExon 5: 1 known disease-causing siteExon 2: 1 known disease-causing siteExon 13: 63,832,081–63,832,991, 911 basesExon 12: 63,833,069–63,833,170, 102 basesExon 11: 63,833,298–63,833,420, 123 basesExon 10: 63,833,587–63,833,722, 136 basesExon 9: 63,833,909–63,834,006, 98 basesExon 8: 63,834,167–63,834,328, 162 basesExon 7: 63,834,474–63,834,575, 102 basesExon 6: 63,834,705–63,834,800, 96 basesExon 5: 63,835,412–63,835,567, 156 basesExon 4: 63,836,922–63,837,044, 123 basesExon 3: 63,837,195–63,837,237, 43 basesExon 2: 63,837,441–63,837,625, 185 basesExon 1: 63,842,459–63,842,685, 227 bases131210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.5 kb of the gene's 10.6 kb; 1,596 of those bases code for the protein.

How a genome test reads SMARCD2

4

positions in SMARCD2 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 10.6 kb of SMARCD2, introns included, not only the 2.5 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). SMARCD2 gene: SWI/SNF related BAF chromatin remodeling complex subunit D2. Retrieved 17 October 2026, from https://dantelabs.com/genes/smarcd2

Vancouver

Dante Labs. SMARCD2 gene: SWI/SNF related BAF chromatin remodeling complex subunit D2 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/smarcd2

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