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Gene

RNU6-9

RNA, U6 small nuclear 9

Summary

Cytogenetic location
19p13.3
Coordinates
Chromosome 19: 893,484–893,590 (GRCh38)
Exons
1 exon across 0.1 kb
Also known as
U6-9
MANE Select transcript
ENST00000384776.1NR_104080.1
Locus type
RNA, small nuclear

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads RNU6-9 yet. The test sequences your whole genome, so your data includes it all the same.

How RNU6-9 is laid out

  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 19, with a bracket where RNU6-9 sits. RNU6-9 and 45 genes near it on chromosome 19, from 393,537 to 1,393,536.Chromosome 1919p13.3p13.3p13.2p13.13p13.12p13.11p12p11q11q12q13.11q13.12q13.13q13.2q13.31q13.32q13.33q13.41q13.42q13.430.4 Mb0.6 Mb0.8 Mb1 Mb1.2 MbC2CD4C: 405,443–409,214, reverse strandC2CD4CSHC2: 416,315–461,100, reverse strandSHC2CIMAP1D: 462,728–474,983, reverse strandCIMAP1DMADCAM1: 489,176–505,343, forward strandMADCAM1TPGS1: 507,488–520,846, forward strandTPGS1CDC34: 531,435–542,092, forward strandCDC34GZMM: 544,034–549,924, forward strandGZMMBSG: 571,277–583,498, forward strandBSGHCN2: 589,881–617,159, forward strandHCN2POLRMT: 617,168–633,619, reverse strandPOLRMTFGF22: 639,879–644,373, forward strandFGF22RNF126: 647,526–663,336, reverse strandRNF126FSTL3: 676,366–683,793, forward strandFSTL3PRSS57: 685,546–695,498, reverse strandPRSS57PALM: 708,906–748,329, forward strandPALMMISP: 748,404–764,363, forward strandMISPPTBP1: 797,075–812,327, forward strandPTBP1PLPPR3: 810,908–822,619, reverse strandAZU1: 825,097–832,018, forward strandAZU1PRTN3: 840,999–848,255, forward strandPRTN3ELANE: 850,951–856,247, forward strandCFD: 859,426–869,492, forward strandCFDMED16: 867,630–893,222, reverse strandMED16RNU6-9: 893,484–893,590, forward strandRNU6-9R3HDM4: 896,503–913,245, reverse strandR3HDM4KISS1R: 917,287–921,005, forward strandKISS1RARID3A: 924,528–975,939, forward strandARID3AWDR18: 984,248–998,438, forward strandWDR18GRIN3B: 1,000,419–1,009,732, forward strandGRIN3BTMEM259: 1,009,615–1,021,270, reverse strandTMEM259CNN2: 1,026,270–1,039,077, forward strandCNN2ABCA7: 1,039,997–1,065,572, forward strandABCA7ARHGAP45: 1,065,923–1,087,829, forward strandARHGAP45POLR2E: 1,085,104–1,095,486, reverse strandPOLR2EGPX4: 1,103,982–1,106,791, forward strandGPX4SBNO2: 1,107,634–1,174,295, reverse strandSBNO2STK11: 1,177,558–1,228,431, forward strandSTK11CBARP: 1,228,282–1,239,465, reverse strandCBARPATP5F1D: 1,241,734–1,244,828, forward strandATP5F1DMIDN: 1,248,316–1,259,145, forward strandMIDNCIRBP: 1,259,384–1,274,880, forward strandCIRBPFAM174C: 1,275,509–1,279,244, forward strandFAM174C: 1,276,021–1,279,244, forward strandEFNA2: 1,285,873–1,301,431, forward strandPWWP3A: 1,354,293–1,378,434, forward strandPWWP3ANDUFS7: 1,383,527–1,395,590, forward strandNDUFS7Diagram of RNU6-9: one exon on the forward strand of chromosome 19Exon 1: 893,484–893,590, 107 bases15′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 0.1 kb of the gene's 0.1 kb.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). RNU6-9 gene: RNA, U6 small nuclear 9. Retrieved 16 October 2026, from https://dantelabs.com/genes/rnu6-9

Vancouver

Dante Labs. RNU6-9 gene: RNA, U6 small nuclear 9 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/rnu6-9

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