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Gene

NPAT

nuclear protein, coactivator of histone transcription

Summary

Cytogenetic location
11q22.3
Coordinates
Chromosome 11: 108,157,215–108,222,638 (GRCh38)
Exons
18 exons across 65.4 kb
Protein
1,427 amino acids
Also known as
E14, p220
MANE Select transcript
ENST00000278612.9NM_002519.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads NPAT yet. The test sequences your whole genome, so your data includes it all the same.

How NPAT is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 11, with a bracket where NPAT sits. NPAT and 10 genes near it on chromosome 11, from 107,689,927 to 108,689,926.Chromosome 1111q22.3p15.5p15.4p15.3p15.2p15.1p14.3p14.2p14.1p13p12p11.2p11.12p11.11q11q12.1q12.2q12.3q13.1q13.2q13.3q13.4q13.5q14.1q14.2q14.3q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q25107.8 Mb108 Mb108.2 Mb108.4 Mb108.6 MbSLN: 107,706,978–107,719,703, reverse strandSLNSLC35F2: 107,790,455–107,928,293, reverse strandSLC35F2RAB39A: 107,928,448–107,968,143, forward strandRAB39ACUL5: 108,008,821–108,107,781, forward strandCUL5ACAT1: 108,116,695–108,148,957, forward strandACAT1NPAT: 108,157,215–108,222,638, reverse strandNPATATM: 108,222,788–108,369,102, forward strandATMC11orf65: 108,308,519–108,467,536, reverse strandC11orf65POGLUT3: 108,472,106–108,498,603, reverse strandPOGLUT3EXPH5: 108,505,435–108,593,780, reverse strandEXPH5DDX10: 108,665,053–108,940,999, forward strandDDX10Diagram of NPAT: 18 exons on the reverse strand of chromosome 11Exon 18: 108,157,215–108,159,019, 1,805 basesExon 17: 108,160,880–108,162,014, 1,135 basesExon 16: 108,162,120–108,162,180, 61 basesExon 15: 108,169,744–108,169,852, 109 basesExon 14: 108,169,928–108,170,043, 116 basesExon 13: 108,172,199–108,173,851, 1,653 basesExon 12: 108,176,246–108,176,374, 129 basesExon 11: 108,176,994–108,177,090, 97 basesExon 10: 108,185,232–108,185,319, 88 basesExon 9: 108,185,403–108,185,494, 92 basesExon 8: 108,186,482–108,186,569, 88 basesExon 7: 108,188,098–108,188,179, 82 basesExon 6: 108,189,106–108,189,330, 225 basesExon 5: 108,190,460–108,190,500, 41 basesExon 4: 108,192,118–108,192,190, 73 basesExon 3: 108,193,957–108,194,017, 61 basesExon 2: 108,197,302–108,197,420, 119 basesExon 1: 108,222,500–108,222,638, 139 bases181510515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.1 kb of the gene's 65.4 kb; 4,284 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). NPAT gene: nuclear protein, coactivator of histone transcription. Retrieved 17 October 2026, from https://dantelabs.com/genes/npat

Vancouver

Dante Labs. NPAT gene: nuclear protein, coactivator of histone transcription [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/npat

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