Skip to content
Use your HSA or FSA funds

Gene

BCAS3

BCAS3 microtubule associated cell migration factor

Summary

Cytogenetic location
17q23.2
Coordinates
Chromosome 17: 60,677,851–61,392,831 (GRCh38)
Exons
24 exons across 715 kb
Protein
913 amino acids
Also known as
FLJ20128, PHAF2
MANE Select transcript
ENST00000407086.8NM_017679.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads BCAS3 yet. The test sequences your whole genome, so your data includes it all the same.

How BCAS3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Known disease-causing sites
  • Stretches short reads find hard
Chromosome 17, with a bracket where BCAS3 sits. BCAS3 and 15 genes near it on chromosome 17, from 59,962,870 to 62,107,812.Chromosome 1717q23.2p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.360 Mb60.5 Mb61 Mb61.5 Mb62 MbRPS6KB1: 59,893,035–59,963,336, forward strandRPS6KB1RNFT1: 59,896,781–59,964,777, reverse strandRNFT1: 59,940,908–59,973,101, forward strandHEATR6: 60,041,008–60,078,933, reverse strandHEATR6CA4: 60,147,838–60,178,085, forward strandCA4USP32: 60,177,184–60,422,470, reverse strandUSP32CHCT1: 60,392,429–60,431,426, forward strandCHCT1APPBP2: 60,443,158–60,526,242, reverse strandAPPBP2PPM1D: 60,599,735–60,666,293, forward strandPPM1DBCAS3: 60,677,851–61,392,831, forward strandBCAS3TBX2: 61,399,630–61,409,466, forward strandTBX2TBX4: 61,451,906–61,485,110, forward strandTBX4NACA2: 61,590,421–61,591,219, reverse strandNACA2BRIP1: 61,679,139–61,863,561, reverse strandBRIP1INTS2: 61,865,367–61,928,016, reverse strandINTS2MED13: 61,942,546–62,065,365, reverse strandMED13Diagram of BCAS3: 24 exons on the forward strand of chromosome 17Exon 6: 1 known disease-causing siteExon 16: 1 known disease-causing siteExon 17: 1 known disease-causing siteExon 18: 1 known disease-causing siteExon 20: 1 known disease-causing siteExon 1: 60,677,851–60,677,914, 64 basesExon 2: 60,679,453–60,679,540, 88 basesExon 3: 60,683,982–60,684,036, 55 basesExon 4: 60,689,686–60,689,761, 76 basesExon 5: 60,709,219–60,709,325, 107 basesExon 6: 60,747,198–60,747,279, 82 basesExon 7: 60,808,004–60,808,076, 73 basesExon 8: 60,868,576–60,868,683, 108 basesExon 9: 60,874,662–60,874,738, 77 basesExon 10: 60,889,695–60,889,771, 77 basesExon 11: 60,902,620–60,902,703, 84 basesExon 12: 60,910,532–60,910,702, 171 basesExon 13: 60,924,407–60,924,500, 94 basesExon 14: 60,947,219–60,947,352, 134 basesExon 15: 60,989,971–60,990,235, 265 basesExon 16: 61,015,751–61,015,901, 151 basesExon 17: 61,034,666–61,034,790, 125 basesExon 18: 61,037,889–61,038,054, 166 basesExon 19: 61,040,792–61,040,892, 101 basesExon 20: 61,074,920–61,075,020, 101 basesExon 21: 61,078,333–61,078,529, 197 basesExon 22: 61,084,467–61,084,564, 98 basesExon 23: 61,368,327–61,368,494, 168 basesExon 24: 61,391,977–61,392,831, 855 bases15101520245′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.5 kb of the gene's 715 kb; 2,742 of those bases code for the protein.

How a genome test reads BCAS3

5

positions in BCAS3 where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 715 kb of BCAS3, introns included, not only the 3.5 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). BCAS3 gene: BCAS3 microtubule associated cell migration factor. Retrieved 17 October 2026, from https://dantelabs.com/genes/bcas3

Vancouver

Dante Labs. BCAS3 gene: BCAS3 microtubule associated cell migration factor [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/bcas3

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test