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Gene

TRIM46

tripartite motif containing 46

Summary

Cytogenetic location
1q22
Coordinates
Chromosome 1: 155,173,849–155,184,970 (GRCh38)
Exons
10 exons across 11.1 kb
Protein
759 amino acids
Also known as
FLJ23229, TRIFIC
MANE Select transcript
ENST00000334634.9NM_025058.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads TRIM46 yet. The test sequences your whole genome, so your data includes it all the same.

How TRIM46 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where TRIM46 sits. TRIM46 and 35 genes near it on chromosome 1, from 154,679,410 to 155,679,409.Chromosome 11q22p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44154.8 Mb155 Mb155.2 Mb155.4 Mb155.6 MbKCNN3: 154,697,455–154,870,340, reverse strandKCNN3PMVK: 154,924,732–154,937,008, reverse strandPMVKPBXIP1: 154,944,059–154,956,451, reverse strandPYGO2: 154,957,025–154,963,853, reverse strandSHC1: 154,962,284–154,974,452, reverse strandSHC1CKS1B: 154,974,641–154,979,256, forward strandCKS1BFLAD1: 154,983,311–154,993,111, forward strandFLAD1LENEP: 154,993,586–154,994,315, forward strandLENEPZBTB7B: 155,002,543–155,018,525, forward strandDCST2: 155,018,520–155,033,781, reverse strandDCST1: 155,033,824–155,050,930, forward strandADAM15: 155,050,566–155,062,780, forward strandADAM15EFNA4: 155,063,718–155,069,553, forward strandEFNA4EFNA4-EFNA3: 155,063,748–155,086,807, forward strandEFNA4-EFNA3EFNA3: 155,078,823–155,087,538, forward strandEFNA3EFNA1: 155,127,452–155,134,899, forward strandEFNA1SLC50A1: 155,135,344–155,138,857, forward strandDPM3: 155,138,457–155,140,595, reverse strandDPM3KRTCAP2: 155,169,182–155,173,475, reverse strandKRTCAP2: 155,169,409–155,187,272, reverse strandTRIM46: 155,173,849–155,184,970, forward strandTRIM46MUC1: 155,185,824–155,192,916, reverse strandMUC1THBS3: 155,195,584–155,209,203, reverse strandMTX1: 155,208,695–155,213,824, forward strandGBA1: 155,231,270–155,245,178, reverse strandGBA1ENTREP3: 155,247,205–155,255,824, reverse strandENTREP3SCAMP3: 155,255,979–155,262,433, reverse strandSCAMP3CLK2: 155,262,747–155,278,491, reverse strandCLK2HCN3: 155,277,328–155,289,848, forward strandHCN3PKLR: 155,289,265–155,301,443, reverse strandFDPS: 155,304,786–155,320,666, forward strandFDPSRUSC1: 155,320,739–155,331,422, forward strandRUSC1ASH1L: 155,335,268–155,563,162, reverse strandASH1LMSTO1: 155,563,235–155,616,644, forward strandMSTO1: 155,626,755–155,648,640, reverse strandYY1AP1: 155,659,446–155,689,334, reverse strandYY1AP1Diagram of TRIM46: 10 exons on the forward strand of chromosome 1Exon 1: 155,173,849–155,174,029, 181 basesExon 2: 155,175,386–155,175,647, 262 basesExon 3: 155,175,888–155,176,231, 344 basesExon 4: 155,176,932–155,177,075, 144 basesExon 5: 155,177,195–155,177,290, 96 basesExon 6: 155,178,002–155,178,255, 254 basesExon 7: 155,178,492–155,178,613, 122 basesExon 8: 155,179,632–155,179,934, 303 basesExon 9: 155,181,852–155,182,149, 298 basesExon 10: 155,183,797–155,184,970, 1,174 bases123456789105′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.2 kb of the gene's 11.1 kb; 2,280 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). TRIM46 gene: tripartite motif containing 46. Retrieved 17 October 2026, from https://dantelabs.com/genes/trim46

Vancouver

Dante Labs. TRIM46 gene: tripartite motif containing 46 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/trim46

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