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Gene

SH3GL1

SH3 domain containing GRB2 like 1, endophilin A2

Summary

Cytogenetic location
19p13.3
Coordinates
Chromosome 19: 4,360,370–4,400,547 (GRCh38)
Exons
10 exons across 40.2 kb
Protein
368 amino acids
Also known as
SH3P8, SH3D2B, CNSA1, EEN, MGC111371
MANE Select transcript
ENST00000269886.7NM_003025.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SH3GL1 yet. The test sequences your whole genome, so your data includes it all the same.

How SH3GL1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 19, with a bracket where SH3GL1 sits. SH3GL1 and 31 genes near it on chromosome 19, from 3,880,459 to 4,880,458.Chromosome 1919p13.3p13.3p13.2p13.13p13.12p13.11p12p11q11q12q13.11q13.12q13.13q13.2q13.31q13.32q13.33q13.41q13.42q13.434 Mb4.2 Mb4.4 Mb4.6 Mb4.8 MbATCAY: 3,879,864–3,928,082, forward strandATCAYNMRK2: 3,932,994–3,943,081, forward strandNMRK2DAPK3: 3,958,453–3,971,130, reverse strandDAPK3EEF2: 3,976,044–3,985,479, reverse strandEEF2PIAS4: 4,007,690–4,039,386, forward strandPIAS4ZBTB7A: 4,041,419–4,067,636, reverse strandZBTB7AMAP2K2: 4,090,316–4,124,238, reverse strandMAP2K2CREB3L3: 4,152,949–4,173,057, forward strandCREB3L3SIRT6: 4,174,104–4,182,604, reverse strandSIRT6ANKRD24: 4,182,630–4,224,818, forward strandANKRD24EBI3: 4,229,267–4,238,167, forward strandEBI3YJU2: 4,247,062–4,269,091, forward strandYJU2SHD: 4,279,013–4,290,728, forward strandSHDTMIGD2: 4,292,227–4,302,431, reverse strandTMIGD2FSD1: 4,304,587–4,323,844, forward strandFSD1STAP2: 4,324,040–4,342,786, reverse strandSTAP2MPND: 4,343,527–4,360,086, forward strandMPNDSH3GL1: 4,360,370–4,400,547, reverse strandSH3GL1CHAF1A: 4,402,522–4,445,018, forward strandCHAF1AUBXN6: 4,444,999–4,457,794, reverse strandUBXN6HDGFL2: 4,472,244–4,502,225, forward strandHDGFL2PLIN4: 4,502,182–4,520,379, reverse strandPLIN4PLIN5: 4,522,527–4,535,285, reverse strandPLIN5: 4,528,427–4,540,067, reverse strandLRG1: 4,536,402–4,540,104, reverse strandLRG1SEMA6B: 4,542,588–4,581,795, reverse strandTIPE1: 4,639,503–4,655,568, forward strandTIPE1MYDGF: 4,641,374–4,670,403, reverse strandMYDGFDPP9: 4,674,341–4,724,673, reverse strandDPP9FEM1A: 4,791,734–4,801,273, forward strandFEM1ATICAM1: 4,815,932–4,831,749, reverse strandTICAM1PLIN3: 4,838,334–4,867,717, reverse strandPLIN3Diagram of SH3GL1: 10 exons on the reverse strand of chromosome 19Exon 10: 4,360,370–4,361,796, 1,427 basesExon 9: 4,362,329–4,362,385, 57 basesExon 8: 4,362,612–4,362,736, 125 basesExon 7: 4,363,370–4,363,473, 104 basesExon 6: 4,363,720–4,363,878, 159 basesExon 5: 4,364,088–4,364,221, 134 basesExon 4: 4,365,482–4,365,625, 144 basesExon 3: 4,366,501–4,366,573, 73 basesExon 2: 4,366,926–4,366,994, 69 basesExon 1: 4,400,324–4,400,547, 224 bases10864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.5 kb of the gene's 40.2 kb; 1,107 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). SH3GL1 gene: SH3 domain containing GRB2 like 1, endophilin A2. Retrieved 17 October 2026, from https://dantelabs.com/genes/sh3gl1

Vancouver

Dante Labs. SH3GL1 gene: SH3 domain containing GRB2 like 1, endophilin A2 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/sh3gl1

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