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Gene

LINC01488

long independently transcribed non-coding RNA 1488

Summary

Cytogenetic location
11q13.3
Coordinates
Chromosome 11: 69,481,663–69,493,210 (GRCh38)
Exons
4 exons across 11.5 kb
Also known as
CUPID1
MANE Select transcript
ENST00000717996.1NR_185875.1
Locus type
Long non-coding RNA (lncRNA)

Curated reports relevant to this gene

No Genome Test report reads LINC01488 yet. The test sequences your whole genome, so your data includes it all the same.

How LINC01488 is laid out

  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 11, with a bracket where LINC01488 sits. LINC01488 and 11 genes near it on chromosome 11, from 68,987,437 to 69,987,436.Chromosome 1111q13.3p15.5p15.4p15.3p15.2p15.1p14.3p14.2p14.1p13p12p11.2p11.12p11.11q11q12.1q12.2q12.3q13.1q13.2q13.3q13.4q13.5q14.1q14.2q14.3q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q2569 Mb69.2 Mb69.4 Mb69.6 Mb69.8 MbMRGPRF: 69,004,376–69,014,407, reverse strandMRGPRFTPCN2: 69,048,844–69,136,317, forward strandTPCN2: 69,072,915–69,162,440, forward strandSMIM38: 69,155,478–69,162,440, forward strandSMIM38MYEOV: 69,294,114–69,341,682, forward strandMYEOVLINC01488: 69,481,663–69,493,210, forward strandLINC01488CCND1: 69,641,070–69,654,474, forward strandCCND1LTO1: 69,653,072–69,675,416, reverse strandLTO1FGF19: 69,698,232–69,704,660, reverse strandFGF19FGF4: 69,771,022–69,775,344, reverse strandFGF4FGF3: 69,809,968–69,819,416, reverse strandFGF3ANO1: 69,985,907–70,189,543, forward strandANO1Diagram of LINC01488: 4 exons on the forward strand of chromosome 11Exon 1: 69,481,663–69,481,783, 121 basesExon 2: 69,486,040–69,486,143, 104 basesExon 3: 69,490,495–69,491,441, 947 basesExon 4: 69,492,101–69,493,210, 1,110 bases12345′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.3 kb of the gene's 11.5 kb.

Sequencing LINC01488

0Low

How hard LINC01488 is to sequence with short reads, out of 100

  • Mappability0%
  • Homology0%
  • Repeats2.8%
  • GC content0%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). LINC01488 gene: long independently transcribed non-coding RNA 1488. Retrieved 17 October 2026, from https://dantelabs.com/genes/linc01488

Vancouver

Dante Labs. LINC01488 gene: long independently transcribed non-coding RNA 1488 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/linc01488

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