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Gene

SYNGR3

synaptogyrin 3

Summary

Cytogenetic location
16p13.3
Coordinates
Chromosome 16: 1,989,970–1,994,275 (GRCh38)
Exons
4 exons across 4.3 kb
Protein
229 amino acids
MANE Select transcript
ENST00000248121.7NM_004209.6
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads SYNGR3 yet. The test sequences your whole genome, so your data includes it all the same.

How SYNGR3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 16, with a bracket where SYNGR3 sits. SYNGR3 and 46 genes near it on chromosome 16, from 1,492,123 to 2,492,122.Chromosome 1616p13.3p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.31.6 Mb1.8 Mb2 Mb2.2 Mb2.4 MbTELO2: 1,493,329–1,512,551, forward strandTELO2IFT140: 1,510,427–1,612,082, reverse strandIFT140TMEM204: 1,528,674–1,555,580, forward strandTMEM204CRAMP1: 1,612,337–1,677,908, forward strandCRAMP1: 1,632,259–1,686,715, forward strandJPT2: 1,678,256–1,702,859, forward strandJPT2MAPK8IP3: 1,706,166–1,770,374, forward strandNME3: 1,770,317–1,771,746, reverse strandMRPS34: 1,771,889–1,773,487, reverse strandEME2: 1,772,283–1,781,708, forward strandSPSB3: 1,776,710–1,793,700, reverse strandNUBP2: 1,782,932–1,789,189, forward strandNUBP2IGFALS: 1,790,227–1,794,971, reverse strandIGFALSHAGH: 1,795,620–1,827,187, reverse strandHAGHFAHD1: 1,826,967–1,842,053, forward strandFAHD1MEIOB: 1,833,986–1,884,294, reverse strandMEIOBHS3ST6: 1,911,475–1,918,415, reverse strandHS3ST6MSRB1: 1,935,685–1,943,270, reverse strandRPL3L: 1,943,791–1,957,606, reverse strandNDUFB10: 1,959,500–1,962,105, forward strandRPS2: 1,961,987–1,965,510, reverse strandRNF151: 1,966,823–1,968,975, forward strandTBL3: 1,971,972–1,983,056, forward strandNOXO1: 1,978,912–1,984,636, reverse strandNOXO1GFER: 1,983,699–1,987,749, forward strandGFERSYNGR3: 1,989,970–1,994,275, forward strandSYNGR3ZNF598: 1,997,654–2,009,821, reverse strandZNF598NPW: 2,009,926–2,020,755, forward strandNHERF2: 2,025,356–2,039,026, forward strandNTHL1: 2,039,814–2,047,866, reverse strandNTHL1TSC2: 2,047,345–2,089,491, forward strandTSC2PKD1: 2,088,708–2,135,898, reverse strandPKD1RAB26: 2,140,803–2,154,165, forward strandRAB26TRAF7: 2,155,692–2,178,129, forward strandTRAF7CASKIN1: 2,177,180–2,196,788, reverse strandCASKIN1MLST8: 2,204,248–2,209,453, forward strandMLST8BRICD5: 2,209,252–2,210,905, reverse strandBRICD5PGP: 2,211,593–2,214,846, reverse strandPGPE4F1: 2,223,440–2,235,743, forward strandDNASE1L2: 2,235,816–2,238,711, forward strandECI1: 2,239,376–2,252,300, reverse strandRNPS1: 2,253,116–2,268,413, reverse strandRNPS1ABCA3: 2,275,878–2,340,788, reverse strandABCA3CCNF: 2,429,394–2,458,913, forward strandCCNFTEDC2: 2,460,085–2,464,963, forward strandTEDC2NTN3: 2,471,286–2,474,145, forward strandNTN3TBC1D24: 2,475,051–2,509,671, forward strandTBC1D24Diagram of SYNGR3: 4 exons on the forward strand of chromosome 16Exon 1: 1,989,970–1,990,201, 232 basesExon 2: 1,991,974–1,992,211, 238 basesExon 3: 1,992,636–1,992,778, 143 basesExon 4: 1,992,863–1,994,275, 1,413 bases12345′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2 kb of the gene's 4.3 kb; 690 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SYNGR3 gene: synaptogyrin 3. Retrieved 18 October 2026, from https://dantelabs.com/genes/syngr3

Vancouver

Dante Labs. SYNGR3 gene: synaptogyrin 3 [Internet]. [cited 18 October 2026]. Available from: https://dantelabs.com/genes/syngr3

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