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Gene

HS3ST6

heparan sulfate-glucosamine 3-sulfotransferase 6

Summary

Cytogenetic location
16p13.3
Coordinates
Chromosome 16: 1,911,475–1,918,415 (GRCh38)
Exons
2 exons across 6.9 kb
Protein
342 amino acids
Previous symbols
HS3ST5
MANE Select transcript
ENST00000454677.3NM_001009606.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads HS3ST6 yet. The test sequences your whole genome, so your data includes it all the same.

How HS3ST6 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 16, with a bracket where HS3ST6 sits. HS3ST6 and 47 genes near it on chromosome 16, from 1,414,945 to 2,414,944.Chromosome 1616p13.3p13.3p13.2p13.13p13.12p13.11p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q13q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.31.6 Mb1.8 Mb2 Mb2.2 Mb2.4 MbUQCC4: 1,419,752–1,420,756, reverse strandUQCC4PERCC1: 1,431,078–1,434,441, forward strandPERCC1CCDC154: 1,434,383–1,444,556, reverse strandCCDC154CLCN7: 1,444,934–1,475,104, reverse strandCLCN7PTX4: 1,485,886–1,488,981, reverse strandPTX4TELO2: 1,493,329–1,512,551, forward strandTELO2IFT140: 1,510,427–1,612,082, reverse strandIFT140TMEM204: 1,528,674–1,555,580, forward strandTMEM204CRAMP1: 1,612,337–1,677,908, forward strandCRAMP1: 1,632,259–1,686,715, forward strandJPT2: 1,678,256–1,702,859, forward strandJPT2MAPK8IP3: 1,706,166–1,770,374, forward strandNME3: 1,770,317–1,771,746, reverse strandMRPS34: 1,771,889–1,773,487, reverse strandEME2: 1,772,283–1,781,708, forward strandSPSB3: 1,776,710–1,793,700, reverse strandNUBP2: 1,782,932–1,789,189, forward strandNUBP2IGFALS: 1,790,227–1,794,971, reverse strandIGFALSHAGH: 1,795,620–1,827,187, reverse strandHAGHFAHD1: 1,826,967–1,842,053, forward strandFAHD1MEIOB: 1,833,986–1,884,294, reverse strandMEIOBHS3ST6: 1,911,475–1,918,415, reverse strandHS3ST6MSRB1: 1,935,685–1,943,270, reverse strandMSRB1RPL3L: 1,943,791–1,957,606, reverse strandRPL3LNDUFB10: 1,959,500–1,962,105, forward strandNDUFB10RPS2: 1,961,987–1,965,510, reverse strandRNF151: 1,966,823–1,968,975, forward strandTBL3: 1,971,972–1,983,056, forward strandNOXO1: 1,978,912–1,984,636, reverse strandGFER: 1,983,699–1,987,749, forward strandSYNGR3: 1,989,637–1,994,275, forward strandZNF598: 1,997,654–2,009,821, reverse strandNPW: 2,009,926–2,020,755, forward strandNPWNHERF2: 2,025,356–2,039,026, forward strandNHERF2NTHL1: 2,039,814–2,047,866, reverse strandNTHL1TSC2: 2,047,345–2,089,491, forward strandTSC2PKD1: 2,088,708–2,135,898, reverse strandPKD1RAB26: 2,140,803–2,154,165, forward strandRAB26TRAF7: 2,155,692–2,178,129, forward strandTRAF7CASKIN1: 2,177,180–2,196,788, reverse strandCASKIN1MLST8: 2,204,248–2,209,453, forward strandMLST8BRICD5: 2,209,252–2,210,905, reverse strandBRICD5PGP: 2,211,593–2,214,846, reverse strandPGPE4F1: 2,223,440–2,235,743, forward strandDNASE1L2: 2,235,816–2,238,711, forward strandECI1: 2,239,376–2,252,300, reverse strandRNPS1: 2,253,116–2,268,413, reverse strandRNPS1ABCA3: 2,275,878–2,340,788, reverse strandABCA3Diagram of HS3ST6: 2 exons on the reverse strand of chromosome 16Exon 2: 1,911,475–1,912,205, 731 basesExon 1: 1,917,911–1,918,415, 505 bases215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.2 kb of the gene's 6.9 kb; 1,029 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). HS3ST6 gene: heparan sulfate-glucosamine 3-sulfotransferase 6. Retrieved 16 October 2026, from https://dantelabs.com/genes/hs3st6

Vancouver

Dante Labs. HS3ST6 gene: heparan sulfate-glucosamine 3-sulfotransferase 6 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/hs3st6

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