Skip to content
Use your HSA or FSA funds

Gene

ATG2A

autophagy related 2A

Summary

Cytogenetic location
11q13.1
Coordinates
Chromosome 11: 64,894,546–64,917,209 (GRCh38)
Exons
41 exons across 22.7 kb
Protein
1,938 amino acids
Also known as
KIAA0404, BLTP4A
MANE Select transcript
ENST00000377264.8NM_015104.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads ATG2A yet. The test sequences your whole genome, so your data includes it all the same.

How ATG2A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 11, with a bracket where ATG2A sits. ATG2A and 37 genes near it on chromosome 11, from 64,405,878 to 65,405,877.Chromosome 1111q13.1p15.5p15.4p15.3p15.2p15.1p14.3p14.2p14.1p13p12p11.2p11.12p11.11q11q12.1q12.2q12.3q13.1q13.2q13.3q13.4q13.5q14.1q14.2q14.3q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q2564.6 Mb64.8 Mb65 Mb65.2 Mb65.4 MbSLC22A11: 64,555,632–64,572,875, forward strandSLC22A11SLC22A12: 64,590,641–64,602,353, forward strandSLC22A12NRXN2: 64,606,174–64,723,202, reverse strandNRXN2RASGRP2: 64,726,905–64,745,456, reverse strandRASGRP2PYGM: 64,746,389–64,759,990, reverse strandPYGMSF1: 64,764,605–64,778,802, reverse strandSF1MAP4K2: 64,784,918–64,803,245, reverse strandMAP4K2MEN1: 64,803,500–64,811,294, reverse strandMEN1CDC42BPG: 64,823,051–64,844,735, reverse strandCDC42BPGEHD1: 64,851,642–64,888,372, reverse strandEHD1ATG2A: 64,894,546–64,917,209, reverse strandATG2APPP2R5B: 64,917,553–64,934,480, forward strandPPP2R5BGPHA2: 64,934,471–64,935,894, reverse strandGPHA2MAJIN: 64,937,517–64,972,113, reverse strandMAJINBATF2: 64,987,945–64,997,018, reverse strandBATF2ARL2: 65,013,735–65,024,328, forward strandARL2ARL2-SNX15: 65,014,182–65,040,570, forward strandARL2-SNX15SNX15: 65,027,404–65,040,578, forward strandSNX15SAC3D1: 65,040,897–65,047,320, forward strandNAALADL1: 65,044,818–65,058,558, reverse strandCDCA5: 65,066,299–65,084,164, reverse strandZFPL1: 65,084,210–65,088,409, forward strandZFPL1CATSPERH: 65,084,974–65,089,375, reverse strandVPS51: 65,089,324–65,111,862, forward strandVPS51TM7SF2: 65,111,845–65,116,677, forward strandTM7SF2ZNHIT2: 65,116,403–65,117,701, reverse strandFAU: 65,120,182–65,122,221, reverse strandSYVN1: 65,121,780–65,146,912, reverse strandMRPL49: 65,122,183–65,127,371, forward strandSPDYC: 65,166,137–65,173,380, forward strandSPDYCCAPN1: 65,180,566–65,212,006, forward strandCAPN1POLA2: 65,261,835–65,305,959, forward strandPOLA2: 65,261,928–65,326,543, forward strandCDC42EP2: 65,298,955–65,322,662, forward strandCDC42EP2DPF2: 65,333,792–65,354,262, forward strandDPF2TIGD3: 65,354,746–65,357,613, forward strandTIGD3SLC25A45: 65,375,186–65,384,550, reverse strandSLC25A45FRMD8: 65,386,592–65,413,526, forward strandFRMD8Diagram of ATG2A: 41 exons on the reverse strand of chromosome 11Exon 41: 64,894,546–64,895,209, 664 basesExon 40: 64,895,290–64,895,442, 153 basesExon 39: 64,896,462–64,896,616, 155 basesExon 38: 64,896,748–64,896,869, 122 basesExon 37: 64,897,412–64,897,494, 83 basesExon 36: 64,897,671–64,897,743, 73 basesExon 35: 64,897,839–64,897,974, 136 basesExon 34: 64,898,086–64,898,170, 85 basesExon 33: 64,898,261–64,898,362, 102 basesExon 32: 64,898,636–64,898,842, 207 basesExon 31: 64,900,494–64,900,629, 136 basesExon 30: 64,900,884–64,901,092, 209 basesExon 29: 64,901,962–64,902,176, 215 basesExon 28: 64,902,260–64,902,386, 127 basesExon 27: 64,902,516–64,902,680, 165 basesExon 26: 64,903,288–64,903,364, 77 basesExon 25: 64,903,590–64,903,660, 71 basesExon 24: 64,905,563–64,905,655, 93 basesExon 23: 64,905,742–64,905,848, 107 basesExon 22: 64,906,113–64,906,193, 81 basesExon 21: 64,906,334–64,906,533, 200 basesExon 20: 64,906,665–64,906,815, 151 basesExon 19: 64,907,255–64,907,439, 185 basesExon 18: 64,907,525–64,907,664, 140 basesExon 17: 64,907,748–64,907,890, 143 basesExon 16: 64,908,991–64,909,150, 160 basesExon 15: 64,909,271–64,909,367, 97 basesExon 14: 64,909,681–64,909,924, 244 basesExon 13: 64,910,040–64,910,195, 156 basesExon 12: 64,910,616–64,910,708, 93 basesExon 11: 64,910,807–64,910,954, 148 basesExon 10: 64,911,038–64,911,275, 238 basesExon 9: 64,911,842–64,911,982, 141 basesExon 8: 64,912,085–64,912,249, 165 basesExon 7: 64,912,327–64,912,423, 97 basesExon 6: 64,913,038–64,913,136, 99 basesExon 5: 64,913,266–64,913,401, 136 basesExon 4: 64,913,821–64,913,923, 103 basesExon 3: 64,914,081–64,914,233, 153 basesExon 2: 64,914,338–64,914,500, 163 basesExon 1: 64,916,965–64,917,209, 245 bases412515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.3 kb of the gene's 22.7 kb; 5,817 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). ATG2A gene: autophagy related 2A. Retrieved 17 October 2026, from https://dantelabs.com/genes/atg2a

Vancouver

Dante Labs. ATG2A gene: autophagy related 2A [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/atg2a

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test