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Gene

WNT3

Wnt family member 3

Summary

Cytogenetic location
17q21.31-q21.32
Coordinates
Chromosome 17: 46,762,506–46,818,692 (GRCh38)
Exons
5 exons across 56.2 kb
Protein
355 amino acids
Also known as
MGC131950, MGC138321, MGC138323
Previous symbols
INT4
MANE Select transcript
ENST00000225512.6NM_030753.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads WNT3 yet. The test sequences your whole genome, so your data includes it all the same.

How WNT3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 17, with a bracket where WNT3 sits. WNT3 and 13 genes near it on chromosome 17, from 46,290,599 to 47,290,598.Chromosome 1717q21.31-q21.32p13.3p13.2p13.1p12p11.2p11.1q11.1q11.2q12q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.346.4 Mb46.6 Mb46.8 Mb47 Mb47.2 MbARL17B: 46,271,629–46,361,793, reverse strandARL17BLRRC37A: 46,292,733–46,338,077, forward strandLRRC37AARL17A: 46,431,431–46,579,725, reverse strandARL17ALRRC37A2: 46,511,508–46,556,910, forward strandLRRC37A2NSF: 46,590,661–46,757,679, forward strandNSFWNT3: 46,762,506–46,818,692, reverse strandWNT3WNT9B: 46,833,201–46,886,730, forward strandWNT9BGOSR2: 46,923,075–46,975,524, forward strandGOSR2: 46,923,133–47,049,932, forward strandRPRML: 46,978,156–46,979,253, reverse strandRPRMLCDC27: 47,117,703–47,189,422, reverse strandCDC27MYL4: 47,188,903–47,227,760, forward strandMYL4ITGB3: 47,253,649–47,323,218, forward strandITGB3: 47,253,897–47,344,292, forward strandDiagram of WNT3: 5 exons on the reverse strand of chromosome 17Exon 5: 46,762,506–46,764,621, 2,116 basesExon 4: 46,768,312–46,768,799, 488 basesExon 3: 46,769,783–46,770,048, 266 basesExon 2: 46,773,668–46,773,909, 242 basesExon 1: 46,818,518–46,818,692, 175 bases543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.3 kb of the gene's 56.2 kb; 1,068 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). WNT3 gene: Wnt family member 3. Retrieved 16 October 2026, from https://dantelabs.com/genes/wnt3

Vancouver

Dante Labs. WNT3 gene: Wnt family member 3 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/wnt3

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