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Gene

TFPT

TCF3 fusion partner

Summary

Cytogenetic location
19q13.42
Coordinates
Chromosome 19: 54,107,020–54,115,657 (GRCh38)
Exons
6 exons across 8.6 kb
Protein
253 amino acids
Also known as
FB1, amida, INO80F
MANE Select transcript
ENST00000391759.6NM_013342.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads TFPT yet. The test sequences your whole genome, so your data includes it all the same.

How TFPT is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 19, with a bracket where TFPT sits. TFPT and 32 genes near it on chromosome 19, from 53,611,339 to 54,611,338.Chromosome 1919q13.42p13.3p13.2p13.13p13.12p13.11p12p11q11q12q13.11q13.12q13.13q13.2q13.31q13.32q13.33q13.41q13.42q13.4353.8 Mb54 Mb54.2 Mb54.4 Mb54.6 MbDPRX: 53,600,777–53,637,014, forward strandDPRXNLRP12: 53,792,139–53,824,403, reverse strandNLRP12MYADM: 53,864,763–53,878,125, forward strandMYADMPRKCG: 53,879,190–53,907,652, forward strandPRKCGCACNG7: 53,909,264–53,943,950, forward strandCACNG7CACNG8: 53,962,937–53,990,215, forward strandCACNG8CACNG6: 53,991,605–54,012,670, forward strandCACNG6VSTM1: 54,040,825–54,063,959, reverse strandVSTM1TARM1: 54,069,895–54,081,365, reverse strandOSCAR: 54,094,668–54,102,692, reverse strandOSCARNDUFA3: 54,102,728–54,111,522, forward strandNDUFA3TFPT: 54,107,020–54,115,657, reverse strandTFPTPRPF31: 54,115,410–54,131,719, forward strandPRPF31CNOT3: 54,137,710–54,155,708, forward strandLENG1: 54,155,161–54,159,760, reverse strandLENG1TMC4: 54,160,095–54,173,250, reverse strandTMC4MBOAT7: 54,173,412–54,189,882, reverse strandTSEN34: 54,188,464–54,194,538, forward strandTSEN34RPS9: 54,200,466–54,249,003, forward strandRPS9LILRB3: 54,215,940–54,223,506, reverse strandLILRB3LILRA6: 54,236,590–54,242,820, reverse strandLILRA6LILRB5: 54,249,421–54,257,339, reverse strandLILRB5LILRB2: 54,273,812–54,281,184, reverse strandLILRA5: 54,307,037–54,313,177, reverse strandLILRA5LILRA4: 54,333,185–54,339,162, reverse strandLILRA4LAIR1: 54,351,384–54,370,558, reverse strandLAIR1TTYH1: 54,415,219–54,436,904, forward strandTTYH1LENG8: 54,449,157–54,462,022, forward strandLENG8LENG9: 54,461,732–54,463,778, reverse strandLENG9CDC42EP5: 54,465,026–54,473,316, reverse strandCDC42EP5LAIR2: 54,497,879–54,510,694, forward strandLAIR2LILRA2: 54,572,920–54,590,287, forward strandLILRA2LILRA1: 54,593,582–54,603,259, forward strandLILRA1Diagram of TFPT: 6 exons on the reverse strand of chromosome 19Exon 6: 54,107,020–54,107,169, 150 basesExon 5: 54,108,026–54,108,244, 219 basesExon 4: 54,108,326–54,108,395, 70 basesExon 3: 54,110,051–54,110,121, 71 basesExon 2: 54,114,442–54,114,700, 259 basesExon 1: 54,115,247–54,115,657, 411 bases6543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.2 kb of the gene's 8.6 kb; 762 of those bases code for the protein.

How a genome test reads TFPT

1

position in TFPT where ClinVar classes a change as pathogenic or likely pathogenic

None of them falls in a region short reads find hard.

A whole genome covers all 8.6 kb of TFPT, introns included, not only the 1.2 kb of exons.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • ClinVar and the GIAB stratifications: known disease-causing sites, and the regions short reads find hard.
  • Data release 2026.10.16-c6eea6bf.

Cite this page

APA

Dante Labs. (n.d.). TFPT gene: TCF3 fusion partner. Retrieved 17 October 2026, from https://dantelabs.com/genes/tfpt

Vancouver

Dante Labs. TFPT gene: TCF3 fusion partner [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/tfpt

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