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Gene

SYCP1

synaptonemal complex protein 1

Summary

Cytogenetic location
1p13.2
Coordinates
Chromosome 1: 114,854,863–114,995,370 (GRCh38)
Exons
32 exons across 140.5 kb
Protein
976 amino acids
Also known as
HOM-TES-14, SCP1, CT8
MANE Select transcript
ENST00000369522.8NM_003176.4
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads SYCP1 yet. The test sequences your whole genome, so your data includes it all the same.

How SYCP1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where SYCP1 sits. SYCP1 and 10 genes near it on chromosome 1, from 114,425,117 to 115,425,116.Chromosome 11p13.2p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44114.6 Mb114.8 Mb115 Mb115.2 Mb115.4 MbTRIM33: 114,392,781–114,511,244, reverse strandTRIM33BCAS2: 114,547,043–114,581,725, reverse strandBCAS2DENND2C: 114,582,848–114,670,451, reverse strandDENND2CAMPD1: 114,673,090–114,695,620, reverse strandAMPD1NRAS: 114,704,468–114,716,775, reverse strandNRASCSDE1: 114,716,913–114,758,704, reverse strandCSDE1SIKE1: 114,769,479–114,780,706, reverse strandSIKE1SYCP1: 114,854,863–114,995,370, forward strandSYCP1TSHB: 115,029,826–115,034,302, forward strandTSHBTSPAN2: 115,047,056–115,089,528, reverse strandTSPAN2NGF: 115,285,904–115,338,770, reverse strandNGFDiagram of SYCP1: 32 exons on the forward strand of chromosome 1Exon 1: 114,854,863–114,855,018, 156 basesExon 2: 114,855,441–114,855,572, 132 basesExon 3: 114,856,573–114,856,657, 85 basesExon 4: 114,857,232–114,857,275, 44 basesExon 5: 114,857,444–114,857,497, 54 basesExon 6: 114,858,547–114,858,711, 165 basesExon 7: 114,859,743–114,859,810, 68 basesExon 8: 114,860,736–114,860,809, 74 basesExon 9: 114,874,506–114,874,564, 59 basesExon 10: 114,876,069–114,876,138, 70 basesExon 11: 114,876,737–114,876,810, 74 basesExon 12: 114,878,094–114,878,202, 109 basesExon 13: 114,885,535–114,885,629, 95 basesExon 14: 114,886,125–114,886,309, 185 basesExon 15: 114,887,626–114,887,693, 68 basesExon 16: 114,895,448–114,895,509, 62 basesExon 17: 114,910,397–114,910,501, 105 basesExon 18: 114,911,479–114,911,582, 104 basesExon 19: 114,913,033–114,913,150, 118 basesExon 20: 114,913,975–114,914,045, 71 basesExon 21: 114,923,449–114,923,530, 82 basesExon 22: 114,926,278–114,926,340, 63 basesExon 23: 114,926,501–114,926,563, 63 basesExon 24: 114,944,339–114,944,455, 117 basesExon 25: 114,944,872–114,944,982, 111 basesExon 26: 114,946,289–114,946,381, 93 basesExon 27: 114,947,246–114,947,320, 75 basesExon 28: 114,977,557–114,977,616, 60 basesExon 29: 114,981,336–114,981,512, 177 basesExon 30: 114,984,725–114,984,868, 144 basesExon 31: 114,994,698–114,994,787, 90 basesExon 32: 114,994,882–114,995,370, 489 bases151015202530325′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.5 kb of the gene's 140.5 kb; 2,931 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). SYCP1 gene: synaptonemal complex protein 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/sycp1

Vancouver

Dante Labs. SYCP1 gene: synaptonemal complex protein 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/sycp1

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