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Gene

CSDE1

cold shock domain containing E1

Summary

Cytogenetic location
1p13.2
Coordinates
Chromosome 1: 114,716,916–114,757,984 (GRCh38)
Exons
20 exons across 41.1 kb
Protein
798 amino acids
Also known as
D1S155E, UNR
MANE Select transcript
ENST00000358528.9NM_001007553.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CSDE1 yet. The test sequences your whole genome, so your data includes it all the same.

How CSDE1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where CSDE1 sits. CSDE1 and 9 genes near it on chromosome 1, from 114,237,450 to 115,237,449.Chromosome 11p13.2p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44114.4 Mb114.6 Mb114.8 Mb115 Mb115.2 MbTRIM33: 114,392,781–114,511,244, reverse strandTRIM33BCAS2: 114,547,043–114,581,725, reverse strandBCAS2DENND2C: 114,582,848–114,670,451, reverse strandDENND2CAMPD1: 114,673,090–114,695,620, reverse strandAMPD1NRAS: 114,704,468–114,716,775, reverse strandNRASCSDE1: 114,716,916–114,757,984, reverse strandCSDE1SIKE1: 114,769,479–114,780,706, reverse strandSIKE1SYCP1: 114,854,836–114,995,370, forward strandSYCP1TSHB: 115,029,826–115,034,302, forward strandTSHBTSPAN2: 115,047,056–115,089,528, reverse strandTSPAN2Diagram of CSDE1: 20 exons on the reverse strand of chromosome 1Exon 20: 114,716,916–114,718,216, 1,301 basesExon 19: 114,718,613–114,718,745, 133 basesExon 18: 114,719,579–114,719,742, 164 basesExon 17: 114,720,539–114,720,717, 179 basesExon 16: 114,723,883–114,724,002, 120 basesExon 15: 114,725,221–114,725,333, 113 basesExon 14: 114,726,211–114,726,386, 176 basesExon 13: 114,726,983–114,727,090, 108 basesExon 12: 114,730,258–114,730,422, 165 basesExon 11: 114,730,508–114,730,648, 141 basesExon 10: 114,732,604–114,732,816, 213 basesExon 9: 114,733,732–114,733,857, 126 basesExon 8: 114,733,989–114,734,117, 129 basesExon 7: 114,734,442–114,734,523, 82 basesExon 6: 114,736,758–114,736,855, 98 basesExon 5: 114,737,471–114,737,563, 93 basesExon 4: 114,737,963–114,738,072, 110 basesExon 3: 114,739,692–114,739,890, 199 basesExon 2: 114,749,821–114,750,207, 387 basesExon 1: 114,757,925–114,757,984, 60 bases201816141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.1 kb of the gene's 41.1 kb; 2,397 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CSDE1 gene: cold shock domain containing E1. Retrieved 17 October 2026, from https://dantelabs.com/genes/csde1

Vancouver

Dante Labs. CSDE1 gene: cold shock domain containing E1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/csde1

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