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Gene

RPUSD3

RNA pseudouridine synthase D3

Summary

Cytogenetic location
3p25.3
Coordinates
Chromosome 3: 9,837,849–9,844,008 (GRCh38)
Exons
9 exons across 6.2 kb
Protein
343 amino acids
Also known as
MGC29784
MANE Select transcript
ENST00000383820.10NM_173659.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads RPUSD3 yet. The test sequences your whole genome, so your data includes it all the same.

How RPUSD3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 3, with a bracket where RPUSD3 sits. RPUSD3 and 32 genes near it on chromosome 3, from 9,340,929 to 10,340,928.Chromosome 33p25.3p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q299.4 Mb9.6 Mb9.8 Mb10 Mb10.2 MbSRGAP3: 8,980,591–9,363,053, reverse strandSRGAP3THUMPD3: 9,362,967–9,389,323, forward strandTHUMPD3SETD5: 9,397,609–9,479,240, forward strandSETD5LHFPL4: 9,498,361–9,553,862, reverse strandLHFPL4MTMR14: 9,649,307–9,702,394, forward strandMTMR14CPNE9: 9,703,691–9,729,908, forward strandCPNE9BRPF1: 9,731,726–9,748,019, forward strandBRPF1OGG1: 9,749,938–9,791,067, forward strandOGG1CAMK1: 9,757,341–9,770,606, reverse strandTADA3: 9,779,964–9,793,011, reverse strandARPC4: 9,792,484–9,807,704, forward strandARPC4ARPC4-TTLL3: 9,793,082–9,835,401, forward strandARPC4-TTLL3TTLL3: 9,808,086–9,856,087, forward strandTTLL3RPUSD3: 9,837,849–9,844,008, reverse strandRPUSD3CIDEC: 9,864,169–9,891,008, reverse strandCIDECJAGN1: 9,890,569–9,894,349, forward strandJAGN1IL17RE: 9,902,612–9,916,402, forward strandIL17REIL17RC: 9,917,040–9,933,630, forward strandIL17RC: 9,917,116–9,945,385, forward strandCRELD1: 9,933,791–9,945,413, forward strandPRRT3: 9,939,450–9,952,442, reverse strandEMC3: 9,957,217–10,011,202, reverse strandEMC3FANCD2: 10,026,370–10,101,937, forward strandFANCD2FANCD2OS: 10,081,317–10,108,290, reverse strandFANCD2OSBRK1: 10,115,590–10,135,082, forward strandBRK1VHL: 10,141,764–10,153,676, forward strandVHLIRAK2: 10,164,862–10,243,756, forward strandIRAK2TATDN2: 10,248,023–10,281,218, forward strandTATDN2: 10,249,042–10,249,366, forward strand: 10,249,372–10,285,796, forward strandGHRL: 10,285,666–10,292,959, reverse strandGHRLSEC13: 10,293,131–10,321,207, reverse strandSEC13ATP2B2: 10,324,023–10,708,060, reverse strandATP2B2Diagram of RPUSD3: 9 exons on the reverse strand of chromosome 3Exon 9: 9,837,849–9,838,207, 359 basesExon 8: 9,839,032–9,839,171, 140 basesExon 7: 9,840,184–9,840,307, 124 basesExon 6: 9,840,532–9,840,616, 85 basesExon 5: 9,840,698–9,840,805, 108 basesExon 4: 9,841,983–9,842,082, 100 basesExon 3: 9,842,199–9,842,243, 45 basesExon 2: 9,843,465–9,843,601, 137 basesExon 1: 9,843,890–9,844,008, 119 bases9876543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.2 kb of the gene's 6.2 kb; 1,032 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). RPUSD3 gene: RNA pseudouridine synthase D3. Retrieved 17 October 2026, from https://dantelabs.com/genes/rpusd3

Vancouver

Dante Labs. RPUSD3 gene: RNA pseudouridine synthase D3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/rpusd3

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