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Gene

PIP4K2C

phosphatidylinositol-5-phosphate 4-kinase type 2 gamma

Summary

Cytogenetic location
12q13.3
Coordinates
Chromosome 12: 57,591,192–57,603,418 (GRCh38)
Exons
10 exons across 12.2 kb
Protein
421 amino acids
Also known as
FLJ22055
Previous symbols
PIP5K2C
MANE Select transcript
ENST00000354947.10NM_024779.5
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PIP4K2C yet. The test sequences your whole genome, so your data includes it all the same.

How PIP4K2C is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 12, with a bracket where PIP4K2C sits. PIP4K2C and 35 genes near it on chromosome 12, from 57,097,305 to 58,097,304.Chromosome 1212q13.3p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.3357.2 Mb57.4 Mb57.6 Mb57.8 Mb58 MbSTAT6: 57,095,403–57,132,139, reverse strandSTAT6LRP1: 57,128,476–57,213,394, forward strandLRP1NXPH4: 57,216,780–57,226,449, forward strandSHMT2: 57,226,554–57,234,935, forward strandCOXFA4L2: 57,234,541–57,242,750, reverse strandCOXFA4L2STAC3: 57,243,453–57,251,195, reverse strandSTAC3: 57,249,609–57,296,484, reverse strandR3HDM2: 57,253,762–57,431,051, reverse strandR3HDM2INHBC: 57,434,700–57,452,067, forward strandINHBCINHBE: 57,452,323–57,459,280, forward strandINHBEGLI1: 57,459,783–57,472,268, forward strandGLI1ARHGAP9: 57,472,260–57,488,831, reverse strandMARS1: 57,475,445–57,517,702, forward strandDDIT3: 57,516,584–57,523,630, reverse strandDDIT3: 57,517,712–57,520,480, reverse strandMBD6: 57,520,710–57,530,614, forward strandMBD6DCTN2: 57,529,567–57,547,256, reverse strandDCTN2KIF5A: 57,546,026–57,586,633, forward strandKIF5APIP4K2C: 57,591,192–57,603,418, forward strandPIP4K2CDTX3: 57,604,484–57,609,804, forward strandDTX3ARHGEF25: 57,610,111–57,617,245, forward strandARHGEF25: 57,615,280–57,626,125, forward strandB4GALNT1: 57,623,409–57,633,242, reverse strandOS9: 57,693,841–57,728,342, forward strandOS9AGAP2: 57,723,761–57,742,209, reverse strandAGAP2TSPAN31: 57,738,013–57,751,383, forward strandTSPAN31CDK4: 57,746,043–57,756,013, reverse strandCDK4MARCHF9: 57,754,940–57,760,411, forward strandCYP27B1: 57,762,334–57,768,986, reverse strandMETTL1: 57,768,471–57,772,131, reverse strandEEF1AKMT3: 57,771,492–57,782,544, forward strand: 57,772,660–57,797,554, forward strandTSFM: 57,782,731–57,828,655, forward strandTSFMAVIL: 57,797,376–57,818,734, reverse strandAVILCTDSP2: 57,819,925–57,846,976, reverse strandCTDSP2ATP23: 57,906,039–57,959,148, forward strandATP23Diagram of PIP4K2C: 10 exons on the forward strand of chromosome 12Exon 1: 57,591,192–57,591,463, 272 basesExon 2: 57,594,025–57,594,122, 98 basesExon 3: 57,595,126–57,595,222, 97 basesExon 4: 57,595,888–57,596,031, 144 basesExon 5: 57,599,065–57,599,211, 147 basesExon 6: 57,599,400–57,599,438, 39 basesExon 7: 57,600,324–57,600,437, 114 basesExon 8: 57,600,811–57,601,078, 268 basesExon 9: 57,601,245–57,601,348, 104 basesExon 10: 57,601,526–57,603,418, 1,893 bases123456789105′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.2 kb of the gene's 12.2 kb; 1,266 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PIP4K2C gene: phosphatidylinositol-5-phosphate 4-kinase type 2 gamma. Retrieved 16 October 2026, from https://dantelabs.com/genes/pip4k2c

Vancouver

Dante Labs. PIP4K2C gene: phosphatidylinositol-5-phosphate 4-kinase type 2 gamma [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/pip4k2c

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