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Gene

AGAP2

ArfGAP with GTPase domain, ankyrin repeat and PH domain 2

Summary

Cytogenetic location
12q14.1
Coordinates
Chromosome 12: 57,725,197–57,738,742 (GRCh38)
Exons
19 exons across 13.5 kb
Protein
1,192 amino acids
Previous symbols
CENTG1
MANE Select transcript
ENST00000547588.6NM_001122772.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads AGAP2 yet. The test sequences your whole genome, so your data includes it all the same.

How AGAP2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where AGAP2 sits. AGAP2 and 32 genes near it on chromosome 12, from 57,231,970 to 58,231,969.Chromosome 1212q14.1p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.3357.4 Mb57.6 Mb57.8 Mb58 Mb58.2 MbSHMT2: 57,226,554–57,234,935, forward strandCOXFA4L2: 57,234,541–57,242,750, reverse strandCOXFA4L2STAC3: 57,243,453–57,251,195, reverse strandSTAC3: 57,249,609–57,296,484, reverse strandR3HDM2: 57,253,762–57,431,051, reverse strandR3HDM2INHBC: 57,434,700–57,452,067, forward strandINHBCINHBE: 57,452,323–57,459,280, forward strandINHBEGLI1: 57,459,783–57,472,268, forward strandGLI1ARHGAP9: 57,472,260–57,488,831, reverse strandMARS1: 57,475,445–57,517,702, forward strandDDIT3: 57,516,584–57,523,630, reverse strandDDIT3: 57,517,712–57,520,480, reverse strandMBD6: 57,520,710–57,530,614, forward strandMBD6DCTN2: 57,529,567–57,547,256, reverse strandDCTN2KIF5A: 57,546,026–57,586,633, forward strandPIP4K2C: 57,591,161–57,603,418, forward strandDTX3: 57,604,484–57,609,804, forward strandDTX3ARHGEF25: 57,610,111–57,617,245, forward strandARHGEF25: 57,615,280–57,626,125, forward strandB4GALNT1: 57,623,409–57,633,242, reverse strandB4GALNT1OS9: 57,693,841–57,728,342, forward strandOS9AGAP2: 57,725,197–57,738,742, reverse strandAGAP2TSPAN31: 57,738,013–57,751,383, forward strandTSPAN31CDK4: 57,746,043–57,756,013, reverse strandCDK4MARCHF9: 57,754,940–57,760,411, forward strandCYP27B1: 57,762,334–57,768,986, reverse strandMETTL1: 57,768,471–57,772,131, reverse strandMETTL1EEF1AKMT3: 57,771,492–57,782,544, forward strand: 57,772,660–57,797,554, forward strandTSFM: 57,782,731–57,828,655, forward strandAVIL: 57,797,376–57,818,734, reverse strandAVILCTDSP2: 57,819,925–57,846,976, reverse strandCTDSP2ATP23: 57,906,039–57,959,148, forward strandATP23Diagram of AGAP2: 19 exons on the reverse strand of chromosome 12Exon 19: 57,725,197–57,726,794, 1,598 basesExon 18: 57,726,974–57,727,229, 256 basesExon 17: 57,727,360–57,727,582, 223 basesExon 16: 57,727,681–57,727,771, 91 basesExon 15: 57,727,937–57,728,085, 149 basesExon 14: 57,728,318–57,728,377, 60 basesExon 13: 57,729,639–57,729,767, 129 basesExon 12: 57,730,495–57,730,614, 120 basesExon 11: 57,730,791–57,730,953, 163 basesExon 10: 57,731,366–57,731,470, 105 basesExon 9: 57,731,556–57,731,642, 87 basesExon 8: 57,731,809–57,731,967, 159 basesExon 7: 57,732,403–57,732,512, 110 basesExon 6: 57,732,845–57,732,979, 135 basesExon 5: 57,734,026–57,734,173, 148 basesExon 4: 57,734,319–57,734,404, 86 basesExon 3: 57,734,592–57,734,679, 88 basesExon 2: 57,735,369–57,735,427, 59 basesExon 1: 57,737,079–57,738,742, 1,664 bases191816141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 5.4 kb of the gene's 13.5 kb; 3,579 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). AGAP2 gene: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. Retrieved 17 October 2026, from https://dantelabs.com/genes/agap2

Vancouver

Dante Labs. AGAP2 gene: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/agap2

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