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Gene

PGBD5

piggyBac transposable element derived 5

Summary

Cytogenetic location
1q42.13
Coordinates
Chromosome 1: 230,314,490–230,426,332 (GRCh38)
Exons
7 exons across 111.8 kb
Protein
524 amino acids
Also known as
DKFZp761A0620, FLJ11413
MANE Select transcript
ENST00000391860.7NM_001258311.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PGBD5 yet. The test sequences your whole genome, so your data includes it all the same.

How PGBD5 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where PGBD5 sits. PGBD5 and 5 genes near it on chromosome 1, from 229,870,411 to 230,870,410.Chromosome 11q42.13p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44230 Mb230.2 Mb230.4 Mb230.6 Mb230.8 MbGALNT2: 230,057,990–230,282,128, forward strandGALNT2PGBD5: 230,314,490–230,426,332, reverse strandPGBD5COG2: 230,642,440–230,693,985, forward strandCOG2AGT: 230,690,776–230,745,576, reverse strandAGTCAPN9: 230,747,266–230,804,397, forward strandCAPN9C1orf198: 230,837,119–230,869,589, reverse strandC1orf198Diagram of PGBD5: 7 exons on the reverse strand of chromosome 1Exon 7: 230,314,490–230,323,620, 9,131 basesExon 6: 230,325,310–230,325,415, 106 basesExon 5: 230,332,844–230,333,041, 198 basesExon 4: 230,337,108–230,337,288, 181 basesExon 3: 230,350,958–230,351,092, 135 basesExon 2: 230,356,894–230,357,321, 428 basesExon 1: 230,425,598–230,426,332, 735 bases76543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 10.9 kb of the gene's 111.8 kb; 1,575 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). PGBD5 gene: piggyBac transposable element derived 5. Retrieved 16 October 2026, from https://dantelabs.com/genes/pgbd5

Vancouver

Dante Labs. PGBD5 gene: piggyBac transposable element derived 5 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/pgbd5

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