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Gene

PDCD6IP

programmed cell death 6 interacting protein

Summary

Cytogenetic location
3p22.3
Coordinates
Chromosome 3: 33,798,630–33,869,703 (GRCh38)
Exons
18 exons across 71.1 kb
Protein
868 amino acids
Also known as
Alix, AIP1, Hp95
MANE Select transcript
ENST00000307296.8NM_013374.6
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PDCD6IP yet. The test sequences your whole genome, so your data includes it all the same.

How PDCD6IP is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 3, with a bracket where PDCD6IP sits. PDCD6IP and 3 genes near it on chromosome 3, from 33,334,167 to 34,334,166.Chromosome 33p22.3p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q2933.4 Mb33.6 Mb33.8 Mb34 Mb34.2 MbFBXL2: 33,277,025–33,404,498, forward strandFBXL2UBP1: 33,388,336–33,441,407, reverse strandUBP1CLASP2: 33,496,187–33,718,414, reverse strandCLASP2PDCD6IP: 33,798,630–33,869,703, forward strandPDCD6IPDiagram of PDCD6IP: 18 exons on the forward strand of chromosome 3Exon 1: 33,798,630–33,798,937, 308 basesExon 2: 33,812,072–33,812,126, 55 basesExon 3: 33,813,559–33,813,628, 70 basesExon 4: 33,821,955–33,822,082, 128 basesExon 5: 33,825,187–33,825,340, 154 basesExon 6: 33,826,480–33,826,580, 101 basesExon 7: 33,828,853–33,828,969, 117 basesExon 8: 33,836,044–33,836,266, 223 basesExon 9: 33,838,204–33,838,327, 124 basesExon 10: 33,841,897–33,842,074, 178 basesExon 11: 33,844,112–33,844,223, 112 basesExon 12: 33,845,419–33,845,588, 170 basesExon 13: 33,852,488–33,852,736, 249 basesExon 14: 33,853,879–33,854,013, 135 basesExon 15: 33,855,166–33,855,260, 95 basesExon 16: 33,864,006–33,864,129, 124 basesExon 17: 33,865,243–33,865,430, 188 basesExon 18: 33,866,351–33,869,703, 3,353 bases1246810121416185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 5.9 kb of the gene's 71.1 kb; 2,607 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). PDCD6IP gene: programmed cell death 6 interacting protein. Retrieved 17 October 2026, from https://dantelabs.com/genes/pdcd6ip

Vancouver

Dante Labs. PDCD6IP gene: programmed cell death 6 interacting protein [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/pdcd6ip

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