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Gene

CIZ1

CDKN1A interacting zinc finger protein 1

Summary

Cytogenetic location
9q34.11
Coordinates
Chromosome 9: 128,166,065–128,191,572 (GRCh38)
Exons
17 exons across 25.5 kb
Protein
898 amino acids
Also known as
LSFR1, ZNF356
MANE Select transcript
ENST00000372938.10NM_001131016.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CIZ1 yet. The test sequences your whole genome, so your data includes it all the same.

How CIZ1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 9, with a bracket where CIZ1 sits. CIZ1 and 33 genes near it on chromosome 9, from 127,678,819 to 128,678,818.Chromosome 99q34.11p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.3127.8 Mb128 Mb128.2 Mb128.4 Mb128.6 MbSTXBP1: 127,579,370–127,696,027, forward strandPTRH1: 127,690,102–127,724,885, reverse strandCFAP157: 127,706,979–127,716,002, forward strandCFAP157TTC16: 127,716,074–127,731,590, forward strandTTC16TOR2A: 127,731,516–127,735,355, reverse strandTOR2ASH2D3C: 127,738,317–127,778,771, reverse strandSH2D3CCDK9: 127,785,252–127,792,871, forward strandCDK9FPGS: 127,794,597–127,815,065, forward strandFPGSENG: 127,811,130–127,855,232, reverse strandENGAK1: 127,866,435–127,878,558, reverse strandAK1: 127,867,850–127,906,022, reverse strandST6GALNAC6: 127,885,320–127,906,632, reverse strandST6GALNAC4: 127,906,919–127,917,057, reverse strandST6GALNAC4PIP5KL1: 127,920,881–127,930,823, reverse strandPIP5KL1DPM2: 127,935,090–127,937,879, reverse strandDPM2EEIG1: 127,939,491–127,981,075, reverse strandEEIG1NAIF1: 128,061,233–128,068,206, reverse strandNAIF1SLC25A25: 128,068,169–128,109,245, forward strandSLC25A25PTGES2: 128,120,693–128,128,462, reverse strandPTGES2LCN2: 128,149,071–128,153,454, forward strandLCN2BBLN: 128,160,219–128,163,928, forward strandBBLNCIZ1: 128,166,065–128,191,572, reverse strandCIZ1DNM1: 128,191,655–128,255,254, forward strandDNM1GOLGA2: 128,255,829–128,276,036, reverse strandGOLGA2SWI5: 128,275,379–128,316,123, forward strandSWI5TRUB2: 128,305,159–128,322,741, reverse strandTRUB2COQ4: 128,322,483–128,334,073, forward strandCOQ4SLC27A4: 128,340,475–128,363,283, forward strandSLC27A4URM1: 128,371,341–128,392,017, forward strandURM1CERCAM: 128,411,575–128,437,362, forward strandCERCAMODF2: 128,455,181–128,502,162, forward strandODF2GLE1: 128,504,655–128,543,874, forward strandGLE1SPTAN1: 128,552,558–128,633,663, forward strandSPTAN1DYNC2I2: 128,633,646–128,656,847, reverse strandDYNC2I2Diagram of CIZ1: 17 exons on the reverse strand of chromosome 9Exon 17: 128,166,065–128,166,406, 342 basesExon 16: 128,166,759–128,166,880, 122 basesExon 15: 128,167,095–128,167,164, 70 basesExon 14: 128,169,052–128,169,201, 150 basesExon 13: 128,169,406–128,169,519, 114 basesExon 12: 128,170,020–128,170,107, 88 basesExon 11: 128,176,351–128,176,475, 125 basesExon 10: 128,177,566–128,177,763, 198 basesExon 9: 128,178,369–128,178,490, 122 basesExon 8: 128,178,709–128,179,415, 707 basesExon 7: 128,180,415–128,180,523, 109 basesExon 6: 128,180,721–128,180,814, 94 basesExon 5: 128,185,547–128,185,776, 230 basesExon 4: 128,187,863–128,187,934, 72 basesExon 3: 128,190,329–128,190,444, 116 basesExon 2: 128,190,688–128,190,862, 175 basesExon 1: 128,191,432–128,191,572, 141 bases171510515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3 kb of the gene's 25.5 kb; 2,697 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Human Phenotype Ontology, release 2026-09-01: the traits linked to the gene. Find out more at hpo.jax.org.

Cite this page

APA

Dante Labs. (n.d.). CIZ1 gene: CDKN1A interacting zinc finger protein 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/ciz1

Vancouver

Dante Labs. CIZ1 gene: CDKN1A interacting zinc finger protein 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ciz1

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