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Gene

CCR5AS

CCR5 antisense RNA

Summary

Cytogenetic location
3p21.31
Coordinates
Chromosome 3: 46,363,984–46,407,066 (GRCh38)
Exons
4 exons across 43.1 kb
MANE Select transcript
ENST00000451485.3NR_125406.2
Locus type
Long non-coding RNA (lncRNA)

Curated reports relevant to this gene

No Genome Test report reads CCR5AS yet. The test sequences your whole genome, so your data includes it all the same.

How CCR5AS is laid out

  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 3, with a bracket where CCR5AS sits. CCR5AS and 22 genes near it on chromosome 3, from 45,885,525 to 46,885,524.Chromosome 33p21.31p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q2946 Mb46.2 Mb46.4 Mb46.6 Mb46.8 MbLZTFL1: 45,823,316–45,916,042, reverse strandLZTFL1CCR9: 45,884,425–45,904,311, forward strandCCR9FYCO1: 45,917,903–45,995,845, reverse strandFYCO1CXCR6: 45,940,915–45,948,640, forward strandCXCR6XCR1: 46,016,988–46,085,850, reverse strandXCR1CCR3: 46,130,890–46,266,717, forward strandCCR3CCR1: 46,201,709–46,208,676, reverse strandCCR1CCR2: 46,353,864–46,360,940, forward strandCCR2CCR5AS: 46,363,984–46,407,066, reverse strandCCR5ASCCR5: 46,370,939–46,377,528, forward strandCCR5CCRL2: 46,407,144–46,412,997, forward strandCCRL2LTF: 46,434,347–46,485,234, reverse strandLTFRTP3: 46,494,611–46,501,506, forward strandRTP3LRRC2: 46,510,358–46,607,097, reverse strandLRRC2CRIPTO: 46,573,633–46,584,684, forward strandCRIPTO: 46,581,150–46,617,226, forward strandFAM240A: 46,612,525–46,626,543, forward strandFAM240AALS2CL: 46,668,994–46,694,071, reverse strandALS2CLTMIE: 46,694,528–46,710,886, forward strandTMIE: 46,712,115–46,812,574, reverse strandPRSS50: 46,712,117–46,717,869, reverse strandPRSS50MYL3: 46,835,109–46,885,911, reverse strandMYL3PTH1R: 46,877,706–46,903,799, forward strandPTH1RDiagram of CCR5AS: 4 exons on the reverse strand of chromosome 3Exon 4: 46,363,984–46,365,045, 1,062 basesExon 3: 46,371,244–46,371,417, 174 basesExon 2: 46,392,825–46,393,052, 228 basesExon 1: 46,406,897–46,407,066, 170 bases43215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.6 kb of the gene's 43.1 kb.

Sequencing CCR5AS

1Low

How hard CCR5AS is to sequence with short reads, out of 100

  • Mappability0%
  • Homology0%
  • Repeats4%
  • GC content0%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). CCR5AS gene: CCR5 antisense RNA. Retrieved 18 October 2026, from https://dantelabs.com/genes/ccr5as

Vancouver

Dante Labs. CCR5AS gene: CCR5 antisense RNA [Internet]. [cited 18 October 2026]. Available from: https://dantelabs.com/genes/ccr5as

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