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Gene

XCR1

X-C motif chemokine receptor 1

Summary

Cytogenetic location
3p21.31
Coordinates
Chromosome 3: 46,017,007–46,027,483 (GRCh38)
Exons
2 exons across 10.5 kb
Protein
333 amino acids
Previous symbols
GPR5, CCXCR1
MANE Select transcript
ENST00000309285.4NM_001024644.2
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads XCR1 yet. The test sequences your whole genome, so your data includes it all the same.

How XCR1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 3, with a bracket where XCR1 sits. XCR1 and 16 genes near it on chromosome 3, from 45,522,245 to 46,522,244.Chromosome 33p21.31p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q2945.6 Mb45.8 Mb46 Mb46.2 Mb46.4 MbLARS2: 45,388,516–45,554,726, forward strandLARS2LIMD1: 45,555,394–45,686,341, forward strandLIMD1SACM1L: 45,689,056–45,745,425, forward strandSACM1LSLC6A20: 45,748,903–45,796,654, reverse strandSLC6A20LZTFL1: 45,823,316–45,916,042, reverse strandLZTFL1CCR9: 45,884,425–45,904,311, forward strandCCR9FYCO1: 45,917,903–45,995,845, reverse strandFYCO1CXCR6: 45,940,915–45,948,640, forward strandCXCR6XCR1: 46,017,007–46,027,483, reverse strandXCR1CCR3: 46,130,890–46,266,717, forward strandCCR3CCR1: 46,201,709–46,208,676, reverse strandCCR1CCR2: 46,353,864–46,360,940, forward strandCCR2CCR5: 46,370,939–46,377,528, forward strandCCR5CCRL2: 46,407,144–46,412,997, forward strandCCRL2LTF: 46,434,347–46,485,234, reverse strandLTFRTP3: 46,494,611–46,501,506, forward strandRTP3LRRC2: 46,510,358–46,607,097, reverse strandLRRC2Diagram of XCR1: 2 exons on the reverse strand of chromosome 3Exon 2: 46,017,007–46,021,978, 4,972 basesExon 1: 46,027,417–46,027,483, 67 bases215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 5 kb of the gene's 10.5 kb; 1,002 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). XCR1 gene: X-C motif chemokine receptor 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/xcr1

Vancouver

Dante Labs. XCR1 gene: X-C motif chemokine receptor 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/xcr1

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