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Gene

AGAP3

ArfGAP with GTPase domain, ankyrin repeat and PH domain 3

Summary

Cytogenetic location
7q36.1
Coordinates
Chromosome 7: 151,086,475–151,144,434 (GRCh38)
Exons
18 exons across 58 kb
Protein
911 amino acids
Previous symbols
CENTG3
MANE Select transcript
ENST00000397238.7NM_031946.7
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads AGAP3 yet. The test sequences your whole genome, so your data includes it all the same.

How AGAP3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 7, with a bracket where AGAP3 sits. AGAP3 and 31 genes near it on chromosome 7, from 150,615,455 to 151,615,454.Chromosome 77q36.1p22.3p22.2p22.1p21.3p21.2p21.1p15.3p15.2p15.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.21q11.22q11.23q21.11q21.12q21.13q21.2q21.3q22.1q22.2q22.3q31.1q31.2q31.31q31.32q31.33q32.1q32.2q32.3q33q34q35q36.1q36.2q36.3150.8 Mb151 Mb151.2 Mb151.4 Mb151.6 MbGIMAP6: 150,625,375–150,632,651, reverse strandGIMAP6GIMAP2: 150,685,647–150,694,763, forward strandGIMAP2GIMAP1: 150,716,606–150,724,284, forward strandGIMAP1GIMAP1-GIMAP5: 150,716,668–150,743,646, forward strandGIMAP1-GIMAP5GIMAP5: 150,722,253–150,750,033, forward strandGIMAP5TMEM176B: 150,789,455–150,823,877, reverse strandTMEM176BTMEM176A: 150,799,598–150,805,122, forward strandTMEM176AAOC1: 150,824,627–150,872,465, forward strandAOC1KCNH2: 150,944,064–150,978,394, reverse strandKCNH2NOS3: 150,991,017–151,015,653, forward strandNOS3ATG9B: 151,012,209–151,024,499, reverse strandATG9BABCB8: 151,028,422–151,047,782, forward strandASIC3: 151,048,292–151,052,756, forward strandCDK5: 151,051,517–151,057,952, reverse strandSLC4A2: 151,057,210–151,076,527, forward strandSLC4A2: 151,061,928–151,061,978, forward strandFASTK: 151,076,585–151,080,881, reverse strandFASTKTMUB1: 151,081,082–151,083,533, reverse strandTMUB1AGAP3: 151,086,475–151,144,434, forward strandAGAP3GBX1: 151,147,669–151,174,745, reverse strandGBX1ASB10: 151,175,684–151,187,832, reverse strandASB10DRC11L: 151,190,873–151,205,496, reverse strandDRC11LH2BK1: 151,207,416–151,210,488, reverse strandH2BK1ABCF2-H2BK1: 151,207,837–151,227,166, reverse strandABCF2: 151,211,484–151,227,264, reverse strandABCF2CHPF2: 151,232,483–151,240,979, forward strandSMARCD3: 151,238,764–151,277,896, reverse strandNUB1: 151,341,704–151,381,097, forward strandNUB1WDR86: 151,375,909–151,410,727, reverse strandWDR86CRYGN: 151,428,293–151,440,813, reverse strandCRYGNRHEB: 151,465,976–151,520,120, reverse strandRHEBPRKAG2: 151,556,010–151,877,563, reverse strandPRKAG2Diagram of AGAP3: 18 exons on the forward strand of chromosome 7Exon 1: 151,086,475–151,087,072, 598 basesExon 2: 151,116,793–151,116,851, 59 basesExon 3: 151,117,095–151,117,182, 88 basesExon 4: 151,117,371–151,117,456, 86 basesExon 5: 151,117,636–151,117,777, 142 basesExon 6: 151,118,210–151,118,344, 135 basesExon 7: 151,118,505–151,118,632, 128 basesExon 8: 151,119,987–151,120,145, 159 basesExon 9: 151,123,794–151,123,886, 93 basesExon 10: 151,128,580–151,128,684, 105 basesExon 11: 151,134,400–151,134,568, 169 basesExon 12: 151,138,143–151,138,313, 171 basesExon 13: 151,139,979–151,140,116, 138 basesExon 14: 151,141,898–151,142,052, 155 basesExon 15: 151,142,163–151,142,253, 91 basesExon 16: 151,142,412–151,142,634, 223 basesExon 17: 151,143,341–151,143,596, 256 basesExon 18: 151,143,737–151,144,434, 698 bases151015185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.5 kb of the gene's 58 kb; 2,736 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). AGAP3 gene: ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/agap3

Vancouver

Dante Labs. AGAP3 gene: ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/agap3

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